RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 A6NED7 52 aa2.9□□□□□ -1.95
KTN1-213ENST00000554306 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
KTN1-213ENST00000554306 A6NN06 94 aa2.88□□□□□ -1.95
KTN1-213ENST00000554306 MT1BP07438 61 aa2.88□□□□□ -1.95
KTN1-213ENST00000554306 SPINT4Q6UDR6 99 aa2.86□□□□□ -1.95
KTN1-213ENST00000554306 K7ERS5 55 aa2.84□□□□□ -1.95
KTN1-213ENST00000554306 CAMK2N1Q7Z7J9 78 aa2.84□□□□□ -1.95
KTN1-213ENST00000554306 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
KTN1-213ENST00000554306 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
KTN1-213ENST00000554306 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
KTN1-213ENST00000554306 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
KTN1-213ENST00000554306 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
KTN1-213ENST00000554306 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
KTN1-213ENST00000554306 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
KTN1-213ENST00000554306 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
KTN1-213ENST00000554306 USH2AO75445 5202 aa2.75□□□□□ -1.97
KTN1-213ENST00000554306 MT1XP80297 61 aa2.75□□□□□ -1.97
KTN1-213ENST00000554306 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
KTN1-213ENST00000554306 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
KTN1-213ENST00000554306 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
KTN1-213ENST00000554306 TNP1P09430 55 aa2.67□□□□□ -1.98
KTN1-213ENST00000554306 ROMO1P60602 79 aa2.65□□□□□ -1.99
KTN1-213ENST00000554306 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
KTN1-213ENST00000554306 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
KTN1-213ENST00000554306 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
KTN1-213ENST00000554306 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
KTN1-213ENST00000554306 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
KTN1-213ENST00000554306 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
KTN1-213ENST00000554306 KRTAP6-3Q3LI67 103 aa2.53□□□□□ -2
KTN1-213ENST00000554306 SPRR2FQ96RM1 72 aa2.51□□□□□ -2.01
KTN1-213ENST00000554306 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
KTN1-213ENST00000554306 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
KTN1-213ENST00000554306 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
KTN1-213ENST00000554306 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
KTN1-213ENST00000554306 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
KTN1-213ENST00000554306 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
KTN1-213ENST00000554306 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
KTN1-213ENST00000554306 MT1EP04732 61 aa2.43□□□□□ -2.02
KTN1-213ENST00000554306 KMT2DO14686 5537 aa2.42□□□□□ -2.02
KTN1-213ENST00000554306 SPRR2EP22531 72 aa2.42□□□□□ -2.02
KTN1-213ENST00000554306 SPRR2BP35325 72 aa2.42□□□□□ -2.02
KTN1-213ENST00000554306 SPRR2AP35326 72 aa2.42□□□□□ -2.02
KTN1-213ENST00000554306 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
KTN1-213ENST00000554306 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
KTN1-213ENST00000554306 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
KTN1-213ENST00000554306 MT1GP13640 62 aa2.36□□□□□ -2.03
KTN1-213ENST00000554306 MT1LQ93083 61 aa2.36□□□□□ -2.03
KTN1-213ENST00000554306 SPRR2DP22532 72 aa2.33□□□□□ -2.04
KTN1-213ENST00000554306 MT1MQ8N339 61 aa2.3□□□□□ -2.04
KTN1-213ENST00000554306 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
KTN1-213ENST00000554306 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
KTN1-213ENST00000554306 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
KTN1-213ENST00000554306 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
KTN1-213ENST00000554306 NEBP20929 6669 aa2.23□□□□□ -2.05
KTN1-213ENST00000554306 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
KTN1-213ENST00000554306 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
KTN1-213ENST00000554306 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
KTN1-213ENST00000554306 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
KTN1-213ENST00000554306 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
KTN1-213ENST00000554306 MT1AP04731 61 aa2.02□□□□□ -2.09
KTN1-213ENST00000554306 MT4P47944 62 aa2.02□□□□□ -2.09
KTN1-213ENST00000554306 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
KTN1-213ENST00000554306 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
KTN1-213ENST00000554306 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
KTN1-213ENST00000554306 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
KTN1-213ENST00000554306 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
KTN1-213ENST00000554306 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
KTN1-213ENST00000554306 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
KTN1-213ENST00000554306 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
KTN1-213ENST00000554306 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
KTN1-213ENST00000554306 INE1O15225 51 aa1.58□□□□□ -2.16
KTN1-213ENST00000554306 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
KTN1-213ENST00000554306 PRM1P04553 51 aa1.37□□□□□ -2.19
KTN1-213ENST00000554306 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
KTN1-213ENST00000554306 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
KTN1-213ENST00000554306 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
KTN1-213ENST00000554306 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
KTN1-213ENST00000554306 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms