RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MT1LQ93083 61 aa3.89□□□□□ -1.79
PABPN1-203ENST00000553960 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
PABPN1-203ENST00000553960 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
PABPN1-203ENST00000553960 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
PABPN1-203ENST00000553960 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
PABPN1-203ENST00000553960 MT1GP13640 62 aa3.86□□□□□ -1.79
PABPN1-203ENST00000553960 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
PABPN1-203ENST00000553960 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
PABPN1-203ENST00000553960 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
PABPN1-203ENST00000553960 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
PABPN1-203ENST00000553960 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
PABPN1-203ENST00000553960 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
PABPN1-203ENST00000553960 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
PABPN1-203ENST00000553960 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
PABPN1-203ENST00000553960 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
PABPN1-203ENST00000553960 MT1MQ8N339 61 aa3.74□□□□□ -1.81
PABPN1-203ENST00000553960 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
PABPN1-203ENST00000553960 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
PABPN1-203ENST00000553960 SPRR2EP22531 72 aa3.66□□□□□ -1.82
PABPN1-203ENST00000553960 SPRR2BP35325 72 aa3.66□□□□□ -1.82
PABPN1-203ENST00000553960 SPRR2AP35326 72 aa3.66□□□□□ -1.82
PABPN1-203ENST00000553960 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
PABPN1-203ENST00000553960 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
PABPN1-203ENST00000553960 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
PABPN1-203ENST00000553960 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
PABPN1-203ENST00000553960 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
PABPN1-203ENST00000553960 SPRR2DP22532 72 aa3.54□□□□□ -1.84
PABPN1-203ENST00000553960 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
PABPN1-203ENST00000553960 NEBP20929 6669 aa3.5□□□□□ -1.85
PABPN1-203ENST00000553960 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
PABPN1-203ENST00000553960 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
PABPN1-203ENST00000553960 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
PABPN1-203ENST00000553960 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
PABPN1-203ENST00000553960 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
PABPN1-203ENST00000553960 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
PABPN1-203ENST00000553960 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
PABPN1-203ENST00000553960 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
PABPN1-203ENST00000553960 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
PABPN1-203ENST00000553960 MT1AP04731 61 aa3.35□□□□□ -1.87
PABPN1-203ENST00000553960 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
PABPN1-203ENST00000553960 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
PABPN1-203ENST00000553960 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
PABPN1-203ENST00000553960 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
PABPN1-203ENST00000553960 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
PABPN1-203ENST00000553960 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
PABPN1-203ENST00000553960 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
PABPN1-203ENST00000553960 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
PABPN1-203ENST00000553960 MT3P25713 68 aa3.04□□□□□ -1.92
PABPN1-203ENST00000553960 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
PABPN1-203ENST00000553960 MT4P47944 62 aa2.99□□□□□ -1.93
PABPN1-203ENST00000553960 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
PABPN1-203ENST00000553960 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
PABPN1-203ENST00000553960 INE1O15225 51 aa2.95□□□□□ -1.94
PABPN1-203ENST00000553960 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
PABPN1-203ENST00000553960 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
PABPN1-203ENST00000553960 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
PABPN1-203ENST00000553960 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
PABPN1-203ENST00000553960 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
PABPN1-203ENST00000553960 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
PABPN1-203ENST00000553960 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
PABPN1-203ENST00000553960 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
PABPN1-203ENST00000553960 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
PABPN1-203ENST00000553960 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
PABPN1-203ENST00000553960 LCE1CQ5T751 118 aa2.54□□□□□ -2
PABPN1-203ENST00000553960 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
PABPN1-203ENST00000553960 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
PABPN1-203ENST00000553960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
PABPN1-203ENST00000553960 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
PABPN1-203ENST00000553960 PRM1P04553 51 aa2.3□□□□□ -2.04
PABPN1-203ENST00000553960 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
PABPN1-203ENST00000553960 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
PABPN1-203ENST00000553960 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
PABPN1-203ENST00000553960 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
PABPN1-203ENST00000553960 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
PABPN1-203ENST00000553960 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
PABPN1-203ENST00000553960 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
PABPN1-203ENST00000553960 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PABPN1-203ENST00000553960 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms