RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
SPTB-206ENST00000553938 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
SPTB-206ENST00000553938 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
SPTB-206ENST00000553938 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
SPTB-206ENST00000553938 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
SPTB-206ENST00000553938 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
SPTB-206ENST00000553938 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
SPTB-206ENST00000553938 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
SPTB-206ENST00000553938 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
SPTB-206ENST00000553938 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
SPTB-206ENST00000553938 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.74
SPTB-206ENST00000553938 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
SPTB-206ENST00000553938 MT1LQ93083 61 aa4.13□□□□□ -1.75
SPTB-206ENST00000553938 MT1EP04732 61 aa4.11□□□□□ -1.75
SPTB-206ENST00000553938 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
SPTB-206ENST00000553938 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
SPTB-206ENST00000553938 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
SPTB-206ENST00000553938 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
SPTB-206ENST00000553938 MT1GP13640 62 aa4.02□□□□□ -1.77
SPTB-206ENST00000553938 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SPTB-206ENST00000553938 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
SPTB-206ENST00000553938 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
SPTB-206ENST00000553938 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
SPTB-206ENST00000553938 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SPTB-206ENST00000553938 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
SPTB-206ENST00000553938 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
SPTB-206ENST00000553938 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SPTB-206ENST00000553938 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
SPTB-206ENST00000553938 MT1MQ8N339 61 aa3.84□□□□□ -1.8
SPTB-206ENST00000553938 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
SPTB-206ENST00000553938 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
SPTB-206ENST00000553938 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.81
SPTB-206ENST00000553938 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
SPTB-206ENST00000553938 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
SPTB-206ENST00000553938 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
SPTB-206ENST00000553938 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.82
SPTB-206ENST00000553938 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SPTB-206ENST00000553938 PRM1P04553 51 aa3.62□□□□□ -1.83
SPTB-206ENST00000553938 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
SPTB-206ENST00000553938 NEBP20929 6669 aa3.59□□□□□ -1.83
SPTB-206ENST00000553938 SPRR2EP22531 72 aa3.49□□□□□ -1.85
SPTB-206ENST00000553938 SPRR2BP35325 72 aa3.49□□□□□ -1.85
SPTB-206ENST00000553938 SPRR2AP35326 72 aa3.49□□□□□ -1.85
SPTB-206ENST00000553938 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
SPTB-206ENST00000553938 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
SPTB-206ENST00000553938 MT3P25713 68 aa3.38□□□□□ -1.87
SPTB-206ENST00000553938 MT1AP04731 61 aa3.35□□□□□ -1.87
SPTB-206ENST00000553938 SPRR2DP22532 72 aa3.34□□□□□ -1.88
SPTB-206ENST00000553938 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
SPTB-206ENST00000553938 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
SPTB-206ENST00000553938 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
SPTB-206ENST00000553938 MT4P47944 62 aa3.06□□□□□ -1.92
SPTB-206ENST00000553938 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
SPTB-206ENST00000553938 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
SPTB-206ENST00000553938 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
SPTB-206ENST00000553938 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
SPTB-206ENST00000553938 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
SPTB-206ENST00000553938 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
SPTB-206ENST00000553938 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
SPTB-206ENST00000553938 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SPTB-206ENST00000553938 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SPTB-206ENST00000553938 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SPTB-206ENST00000553938 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
SPTB-206ENST00000553938 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SPTB-206ENST00000553938 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
SPTB-206ENST00000553938 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
SPTB-206ENST00000553938 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SPTB-206ENST00000553938 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
SPTB-206ENST00000553938 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
SPTB-206ENST00000553938 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.04
SPTB-206ENST00000553938 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
SPTB-206ENST00000553938 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SPTB-206ENST00000553938 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SPTB-206ENST00000553938 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
SPTB-206ENST00000553938 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SPTB-206ENST00000553938 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
SPTB-206ENST00000553938 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SPTB-206ENST00000553938 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms