RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MT1XP80297 61 aa2.34□□□□□ -2.03
ATXN3-223ENST00000553686 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
ATXN3-223ENST00000553686 Q1T7F1 81 aa2.33□□□□□ -2.04
ATXN3-223ENST00000553686 LCA10Q71F78 164 aa2.33□□□□□ -2.04
ATXN3-223ENST00000553686 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
ATXN3-223ENST00000553686 K7EQZ3 153 aa2.31□□□□□ -2.04
ATXN3-223ENST00000553686 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
ATXN3-223ENST00000553686 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
ATXN3-223ENST00000553686 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
ATXN3-223ENST00000553686 LINC00472Q9H8W2 130 aa2.3□□□□□ -2.04
ATXN3-223ENST00000553686 C8orf17Q9NRJ1 99 aa2.3□□□□□ -2.04
ATXN3-223ENST00000553686 CASC2Q6XLA1 102 aa2.29□□□□□ -2.04
ATXN3-223ENST00000553686 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ATXN3-223ENST00000553686 H0Y9P7 68 aa2.27□□□□□ -2.05
ATXN3-223ENST00000553686 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
ATXN3-223ENST00000553686 S4R3F8 94 aa2.27□□□□□ -2.05
ATXN3-223ENST00000553686 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
ATXN3-223ENST00000553686 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-223ENST00000553686 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
ATXN3-223ENST00000553686 C7orf65Q6ZTY9 151 aa2.23□□□□□ -2.05
ATXN3-223ENST00000553686 MRPL34Q9BQ48 92 aaKnown RBP2.23□□□□□ -2.05
ATXN3-223ENST00000553686 A8MUN3 132 aa2.22□□□□□ -2.05
ATXN3-223ENST00000553686 NDUFS5O43920 106 aa2.22□□□□□ -2.05
ATXN3-223ENST00000553686 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
ATXN3-223ENST00000553686 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
ATXN3-223ENST00000553686 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-223ENST00000553686 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
ATXN3-223ENST00000553686 COA5Q86WW8 74 aa2.21□□□□□ -2.06
ATXN3-223ENST00000553686 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
ATXN3-223ENST00000553686 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
ATXN3-223ENST00000553686 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-223ENST00000553686 ACYP2P14621 99 aa2.19□□□□□ -2.06
ATXN3-223ENST00000553686 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-223ENST00000553686 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
ATXN3-223ENST00000553686 A6NED7 52 aa2.17□□□□□ -2.06
ATXN3-223ENST00000553686 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
ATXN3-223ENST00000553686 H0YAA0 97 aa2.16□□□□□ -2.06
ATXN3-223ENST00000553686 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-223ENST00000553686 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
ATXN3-223ENST00000553686 MT1GP13640 62 aa2.14□□□□□ -2.07
ATXN3-223ENST00000553686 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
ATXN3-223ENST00000553686 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
ATXN3-223ENST00000553686 MT1EP04732 61 aa2.12□□□□□ -2.07
ATXN3-223ENST00000553686 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
ATXN3-223ENST00000553686 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
ATXN3-223ENST00000553686 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
ATXN3-223ENST00000553686 A0A1B0GU69 56 aa2.1□□□□□ -2.07
ATXN3-223ENST00000553686 UQCR11O14957 56 aa2.1□□□□□ -2.07
ATXN3-223ENST00000553686 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ATXN3-223ENST00000553686 KRTAP19-7Q3SYF9 63 aa2.1□□□□□ -2.07
ATXN3-223ENST00000553686 R4GN34 69 aa2.1□□□□□ -2.07
ATXN3-223ENST00000553686 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
ATXN3-223ENST00000553686 ADM2Q7Z4H4 148 aa2.08□□□□□ -2.08
ATXN3-223ENST00000553686 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
ATXN3-223ENST00000553686 LINC01554Q52M75 96 aa2.04□□□□□ -2.08
ATXN3-223ENST00000553686 MT1MQ8N339 61 aa2.04□□□□□ -2.08
ATXN3-223ENST00000553686 M0QZ58 72 aa2.03□□□□□ -2.08
ATXN3-223ENST00000553686 P0C880 135 aa2.01□□□□□ -2.09
ATXN3-223ENST00000553686 K7ERS5 55 aa2□□□□□ -2.09
ATXN3-223ENST00000553686 A0A1B0GU33 70 aa1.99□□□□□ -2.09
ATXN3-223ENST00000553686 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
ATXN3-223ENST00000553686 MT1LQ93083 61 aa1.95□□□□□ -2.1
ATXN3-223ENST00000553686 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
ATXN3-223ENST00000553686 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
ATXN3-223ENST00000553686 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATXN3-223ENST00000553686 A0A0D9SG42 100 aa1.87□□□□□ -2.11
ATXN3-223ENST00000553686 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
ATXN3-223ENST00000553686 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
ATXN3-223ENST00000553686 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
ATXN3-223ENST00000553686 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
ATXN3-223ENST00000553686 MT1AP04731 61 aa1.66□□□□□ -2.14
ATXN3-223ENST00000553686 TNP1P09430 55 aa1.65□□□□□ -2.15
ATXN3-223ENST00000553686 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
ATXN3-223ENST00000553686 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
ATXN3-223ENST00000553686 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-223ENST00000553686 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
ATXN3-223ENST00000553686 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
ATXN3-223ENST00000553686 PRM1P04553 51 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms