RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 F8W1H4 67 aa4.31□□□□□ -1.72
PRPF39-204ENST00000553605 SMIM6P0DI80 62 aa4.3□□□□□ -1.72
PRPF39-204ENST00000553605 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
PRPF39-204ENST00000553605 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
PRPF39-204ENST00000553605 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
PRPF39-204ENST00000553605 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
PRPF39-204ENST00000553605 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
PRPF39-204ENST00000553605 TNP1P09430 55 aa4.23□□□□□ -1.73
PRPF39-204ENST00000553605 GTF2H5Q6ZYL4 71 aa4.23□□□□□ -1.73
PRPF39-204ENST00000553605 COL5A1-AS1Q5SY13 56 aa4.21□□□□□ -1.74
PRPF39-204ENST00000553605 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
PRPF39-204ENST00000553605 LINC00643Q86TS7 51 aa4.2□□□□□ -1.74
PRPF39-204ENST00000553605 SCGB1A1P11684 91 aa4.11□□□□□ -1.75
PRPF39-204ENST00000553605 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
PRPF39-204ENST00000553605 MT1AP04731 61 aa4.08□□□□□ -1.76
PRPF39-204ENST00000553605 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
PRPF39-204ENST00000553605 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
PRPF39-204ENST00000553605 A0A1B0GU33 70 aa4.05□□□□□ -1.76
PRPF39-204ENST00000553605 SEC61GP60059 68 aa4.05□□□□□ -1.76
PRPF39-204ENST00000553605 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
PRPF39-204ENST00000553605 LOC105371267A0A1B0GV96 52 aa3.96□□□□□ -1.78
PRPF39-204ENST00000553605 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
PRPF39-204ENST00000553605 A8MU10 97 aa3.91□□□□□ -1.78
PRPF39-204ENST00000553605 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
PRPF39-204ENST00000553605 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
PRPF39-204ENST00000553605 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
PRPF39-204ENST00000553605 SNURFQ9Y675 71 aa3.86□□□□□ -1.79
PRPF39-204ENST00000553605 COA5Q86WW8 74 aa3.84□□□□□ -1.79
PRPF39-204ENST00000553605 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-204ENST00000553605 SMIM20Q8N5G0 67 aa3.8□□□□□ -1.8
PRPF39-204ENST00000553605 MT3P25713 68 aa3.78□□□□□ -1.8
PRPF39-204ENST00000553605 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
PRPF39-204ENST00000553605 PCP4L1A6NKN8 68 aa3.76□□□□□ -1.81
PRPF39-204ENST00000553605 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
PRPF39-204ENST00000553605 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
PRPF39-204ENST00000553605 A0A1B0GU69 56 aa3.67□□□□□ -1.82
PRPF39-204ENST00000553605 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
PRPF39-204ENST00000553605 J3QR89 54 aa3.58□□□□□ -1.84
PRPF39-204ENST00000553605 A0A1B0GV90 55 aa3.57□□□□□ -1.84
PRPF39-204ENST00000553605 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
PRPF39-204ENST00000553605 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
PRPF39-204ENST00000553605 H7BZZ5 65 aa3.45□□□□□ -1.86
PRPF39-204ENST00000553605 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
PRPF39-204ENST00000553605 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
PRPF39-204ENST00000553605 K7ERU9 68 aa3.34□□□□□ -1.87
PRPF39-204ENST00000553605 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
PRPF39-204ENST00000553605 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
PRPF39-204ENST00000553605 UQCR11O14957 56 aa3.23□□□□□ -1.89
PRPF39-204ENST00000553605 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
PRPF39-204ENST00000553605 K7ERS5 55 aa3.17□□□□□ -1.9
PRPF39-204ENST00000553605 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
PRPF39-204ENST00000553605 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
PRPF39-204ENST00000553605 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
PRPF39-204ENST00000553605 COX7CP15954 63 aa3.14□□□□□ -1.91
PRPF39-204ENST00000553605 ANAPC13Q9BS18 74 aa3.11□□□□□ -1.91
PRPF39-204ENST00000553605 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.91
PRPF39-204ENST00000553605 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
PRPF39-204ENST00000553605 TMEM258P61165 79 aa2.93□□□□□ -1.94
PRPF39-204ENST00000553605 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
PRPF39-204ENST00000553605 Q1T7F1 81 aa2.84□□□□□ -1.95
PRPF39-204ENST00000553605 PRO0628Q9UI54 55 aa2.83□□□□□ -1.96
PRPF39-204ENST00000553605 ATP5EP56381 51 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-204ENST00000553605 ROMO1P60602 79 aa2.81□□□□□ -1.96
PRPF39-204ENST00000553605 V9GYY9 64 aa2.73□□□□□ -1.97
PRPF39-204ENST00000553605 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
PRPF39-204ENST00000553605 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
PRPF39-204ENST00000553605 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
PRPF39-204ENST00000553605 PSPHP1O15172 72 aa2.65□□□□□ -1.99
PRPF39-204ENST00000553605 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
PRPF39-204ENST00000553605 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
PRPF39-204ENST00000553605 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
PRPF39-204ENST00000553605 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
PRPF39-204ENST00000553605 A6NED7 52 aa2.52□□□□□ -2.01
PRPF39-204ENST00000553605 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
PRPF39-204ENST00000553605 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
PRPF39-204ENST00000553605 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
PRPF39-204ENST00000553605 INE1O15225 51 aa1.74□□□□□ -2.13
PRPF39-204ENST00000553605 PRM1P04553 51 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 69.7 ms