RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PSPHP1O15172 72 aa6.62□□□□□ -1.35
HDAC4-217ENST00000553145 Q1T7F1 81 aa6.6□□□□□ -1.35
HDAC4-217ENST00000553145 V9GYY9 64 aa6.59□□□□□ -1.35
HDAC4-217ENST00000553145 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
HDAC4-217ENST00000553145 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
HDAC4-217ENST00000553145 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
HDAC4-217ENST00000553145 K7ERS5 55 aa6.48□□□□□ -1.37
HDAC4-217ENST00000553145 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
HDAC4-217ENST00000553145 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
HDAC4-217ENST00000553145 A6NED7 52 aa6.38□□□□□ -1.39
HDAC4-217ENST00000553145 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
HDAC4-217ENST00000553145 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
HDAC4-217ENST00000553145 PCP4P48539 62 aa6.31□□□□□ -1.4
HDAC4-217ENST00000553145 MT4P47944 62 aa6.3□□□□□ -1.4
HDAC4-217ENST00000553145 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
HDAC4-217ENST00000553145 KRTAP5-4Q6L8H1 288 aa6.29□□□□□ -1.4
HDAC4-217ENST00000553145 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
HDAC4-217ENST00000553145 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
HDAC4-217ENST00000553145 GPR98Q8WXG9 6306 aa6.2□□□□□ -1.42
HDAC4-217ENST00000553145 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
HDAC4-217ENST00000553145 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
HDAC4-217ENST00000553145 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
HDAC4-217ENST00000553145 ROMO1P60602 79 aa6.11□□□□□ -1.43
HDAC4-217ENST00000553145 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
HDAC4-217ENST00000553145 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
HDAC4-217ENST00000553145 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
HDAC4-217ENST00000553145 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
HDAC4-217ENST00000553145 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
HDAC4-217ENST00000553145 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
HDAC4-217ENST00000553145 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
HDAC4-217ENST00000553145 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
HDAC4-217ENST00000553145 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
HDAC4-217ENST00000553145 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
HDAC4-217ENST00000553145 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
HDAC4-217ENST00000553145 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
HDAC4-217ENST00000553145 MT1AP04731 61 aa5.7□□□□□ -1.5
HDAC4-217ENST00000553145 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
HDAC4-217ENST00000553145 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
HDAC4-217ENST00000553145 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
HDAC4-217ENST00000553145 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
HDAC4-217ENST00000553145 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
HDAC4-217ENST00000553145 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
HDAC4-217ENST00000553145 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
HDAC4-217ENST00000553145 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
HDAC4-217ENST00000553145 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
HDAC4-217ENST00000553145 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
HDAC4-217ENST00000553145 MT3P25713 68 aa5.18□□□□□ -1.58
HDAC4-217ENST00000553145 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
HDAC4-217ENST00000553145 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
HDAC4-217ENST00000553145 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
HDAC4-217ENST00000553145 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
HDAC4-217ENST00000553145 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
HDAC4-217ENST00000553145 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
HDAC4-217ENST00000553145 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
HDAC4-217ENST00000553145 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
HDAC4-217ENST00000553145 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
HDAC4-217ENST00000553145 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
HDAC4-217ENST00000553145 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
HDAC4-217ENST00000553145 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
HDAC4-217ENST00000553145 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
HDAC4-217ENST00000553145 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
HDAC4-217ENST00000553145 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
HDAC4-217ENST00000553145 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
HDAC4-217ENST00000553145 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
HDAC4-217ENST00000553145 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
HDAC4-217ENST00000553145 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
HDAC4-217ENST00000553145 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
HDAC4-217ENST00000553145 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
HDAC4-217ENST00000553145 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
HDAC4-217ENST00000553145 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
HDAC4-217ENST00000553145 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
HDAC4-217ENST00000553145 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
HDAC4-217ENST00000553145 PRM1P04553 51 aa3.15□□□□□ -1.91
HDAC4-217ENST00000553145 INE1O15225 51 aa2.7□□□□□ -1.98
HDAC4-217ENST00000553145 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
HDAC4-217ENST00000553145 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
HDAC4-217ENST00000553145 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
HDAC4-217ENST00000553145 H3BS24 57 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms