RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
ACTR6-213ENST00000553038 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
ACTR6-213ENST00000553038 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
ACTR6-213ENST00000553038 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
ACTR6-213ENST00000553038 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
ACTR6-213ENST00000553038 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.58
ACTR6-213ENST00000553038 MT1EP04732 61 aa5.07□□□□□ -1.6
ACTR6-213ENST00000553038 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
ACTR6-213ENST00000553038 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
ACTR6-213ENST00000553038 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
ACTR6-213ENST00000553038 MT1LQ93083 61 aa4.97□□□□□ -1.61
ACTR6-213ENST00000553038 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
ACTR6-213ENST00000553038 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
ACTR6-213ENST00000553038 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
ACTR6-213ENST00000553038 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
ACTR6-213ENST00000553038 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
ACTR6-213ENST00000553038 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
ACTR6-213ENST00000553038 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
ACTR6-213ENST00000553038 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
ACTR6-213ENST00000553038 MT1GP13640 62 aa4.84□□□□□ -1.64
ACTR6-213ENST00000553038 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.64
ACTR6-213ENST00000553038 SPRR2EP22531 72 aa4.8□□□□□ -1.64
ACTR6-213ENST00000553038 SPRR2BP35325 72 aa4.8□□□□□ -1.64
ACTR6-213ENST00000553038 SPRR2AP35326 72 aa4.8□□□□□ -1.64
ACTR6-213ENST00000553038 MT1MQ8N339 61 aa4.79□□□□□ -1.64
ACTR6-213ENST00000553038 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
ACTR6-213ENST00000553038 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
ACTR6-213ENST00000553038 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
ACTR6-213ENST00000553038 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
ACTR6-213ENST00000553038 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
ACTR6-213ENST00000553038 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
ACTR6-213ENST00000553038 SPRR2DP22532 72 aa4.63□□□□□ -1.67
ACTR6-213ENST00000553038 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
ACTR6-213ENST00000553038 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
ACTR6-213ENST00000553038 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
ACTR6-213ENST00000553038 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
ACTR6-213ENST00000553038 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
ACTR6-213ENST00000553038 NEBP20929 6669 aa4.55□□□□□ -1.68
ACTR6-213ENST00000553038 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
ACTR6-213ENST00000553038 MT1AP04731 61 aa4.22□□□□□ -1.73
ACTR6-213ENST00000553038 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
ACTR6-213ENST00000553038 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
ACTR6-213ENST00000553038 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
ACTR6-213ENST00000553038 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
ACTR6-213ENST00000553038 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
ACTR6-213ENST00000553038 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
ACTR6-213ENST00000553038 MT4P47944 62 aa4.04□□□□□ -1.76
ACTR6-213ENST00000553038 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
ACTR6-213ENST00000553038 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
ACTR6-213ENST00000553038 MT3P25713 68 aa3.85□□□□□ -1.79
ACTR6-213ENST00000553038 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
ACTR6-213ENST00000553038 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
ACTR6-213ENST00000553038 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
ACTR6-213ENST00000553038 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
ACTR6-213ENST00000553038 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
ACTR6-213ENST00000553038 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
ACTR6-213ENST00000553038 PRM1P04553 51 aa3.59□□□□□ -1.83
ACTR6-213ENST00000553038 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
ACTR6-213ENST00000553038 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
ACTR6-213ENST00000553038 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
ACTR6-213ENST00000553038 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
ACTR6-213ENST00000553038 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
ACTR6-213ENST00000553038 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
ACTR6-213ENST00000553038 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
ACTR6-213ENST00000553038 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
ACTR6-213ENST00000553038 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
ACTR6-213ENST00000553038 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
ACTR6-213ENST00000553038 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
ACTR6-213ENST00000553038 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
ACTR6-213ENST00000553038 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
ACTR6-213ENST00000553038 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
ACTR6-213ENST00000553038 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
ACTR6-213ENST00000553038 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
ACTR6-213ENST00000553038 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
ACTR6-213ENST00000553038 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
ACTR6-213ENST00000553038 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
ACTR6-213ENST00000553038 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
ACTR6-213ENST00000553038 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms