RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
PPFIA2-227ENST00000552948 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
PPFIA2-227ENST00000552948 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
PPFIA2-227ENST00000552948 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
PPFIA2-227ENST00000552948 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
PPFIA2-227ENST00000552948 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
PPFIA2-227ENST00000552948 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
PPFIA2-227ENST00000552948 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
PPFIA2-227ENST00000552948 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
PPFIA2-227ENST00000552948 MT1MQ8N339 61 aa3.61□□□□□ -1.83
PPFIA2-227ENST00000552948 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
PPFIA2-227ENST00000552948 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
PPFIA2-227ENST00000552948 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
PPFIA2-227ENST00000552948 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
PPFIA2-227ENST00000552948 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
PPFIA2-227ENST00000552948 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
PPFIA2-227ENST00000552948 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
PPFIA2-227ENST00000552948 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
PPFIA2-227ENST00000552948 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
PPFIA2-227ENST00000552948 PRM1P04553 51 aa3.38□□□□□ -1.87
PPFIA2-227ENST00000552948 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
PPFIA2-227ENST00000552948 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
PPFIA2-227ENST00000552948 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
PPFIA2-227ENST00000552948 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
PPFIA2-227ENST00000552948 MT1AP04731 61 aa3.24□□□□□ -1.89
PPFIA2-227ENST00000552948 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.89
PPFIA2-227ENST00000552948 SPRR2EP22531 72 aa3.18□□□□□ -1.9
PPFIA2-227ENST00000552948 SPRR2BP35325 72 aa3.18□□□□□ -1.9
PPFIA2-227ENST00000552948 SPRR2AP35326 72 aa3.18□□□□□ -1.9
PPFIA2-227ENST00000552948 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.9
PPFIA2-227ENST00000552948 MDN1Q9NU22 5596 aa3.15□□□□□ -1.91
PPFIA2-227ENST00000552948 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
PPFIA2-227ENST00000552948 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
PPFIA2-227ENST00000552948 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
PPFIA2-227ENST00000552948 SPRR2DP22532 72 aa3.01□□□□□ -1.93
PPFIA2-227ENST00000552948 MT3P25713 68 aa3.01□□□□□ -1.93
PPFIA2-227ENST00000552948 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
PPFIA2-227ENST00000552948 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
PPFIA2-227ENST00000552948 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
PPFIA2-227ENST00000552948 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
PPFIA2-227ENST00000552948 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
PPFIA2-227ENST00000552948 MT4P47944 62 aa2.79□□□□□ -1.96
PPFIA2-227ENST00000552948 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
PPFIA2-227ENST00000552948 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
PPFIA2-227ENST00000552948 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.98
PPFIA2-227ENST00000552948 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
PPFIA2-227ENST00000552948 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
PPFIA2-227ENST00000552948 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.55□□□□□ -2
PPFIA2-227ENST00000552948 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
PPFIA2-227ENST00000552948 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
PPFIA2-227ENST00000552948 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
PPFIA2-227ENST00000552948 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
PPFIA2-227ENST00000552948 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
PPFIA2-227ENST00000552948 NEBP20929 6669 aa2.36□□□□□ -2.03
PPFIA2-227ENST00000552948 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
PPFIA2-227ENST00000552948 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
PPFIA2-227ENST00000552948 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PPFIA2-227ENST00000552948 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
PPFIA2-227ENST00000552948 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
PPFIA2-227ENST00000552948 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
PPFIA2-227ENST00000552948 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
PPFIA2-227ENST00000552948 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
PPFIA2-227ENST00000552948 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
PPFIA2-227ENST00000552948 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
PPFIA2-227ENST00000552948 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
PPFIA2-227ENST00000552948 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
PPFIA2-227ENST00000552948 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
PPFIA2-227ENST00000552948 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
PPFIA2-227ENST00000552948 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
PPFIA2-227ENST00000552948 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
PPFIA2-227ENST00000552948 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
PPFIA2-227ENST00000552948 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
PPFIA2-227ENST00000552948 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
PPFIA2-227ENST00000552948 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
PPFIA2-227ENST00000552948 PHGR1C9JFL3 82 aa1.53□□□□□ -2.17
PPFIA2-227ENST00000552948 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
PPFIA2-227ENST00000552948 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 109.4 ms