RNA–Protein interactions for RNA: ENST00000552712.1

LINC02400-202, Transcript of long intergenic non-protein coding RNA 2400, humanhuman

TSL 2

Gene LINC02400, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02400-202ENST00000552712 A0A1B0GU69 56 aa1.52□□□□□ -2.17
LINC02400-202ENST00000552712 RPS28P62857 69 aaKnown RBP1.52□□□□□ -2.17
LINC02400-202ENST00000552712 Q1T7F1 81 aa1.52□□□□□ -2.17
LINC02400-202ENST00000552712 LINC01554Q52M75 96 aa1.52□□□□□ -2.17
LINC02400-202ENST00000552712 PP632Q6XCG6 107 aa1.52□□□□□ -2.17
LINC02400-202ENST00000552712 SPTSSBQ8NFR3 76 aa1.52□□□□□ -2.17
LINC02400-202ENST00000552712 A0A0D9SG42 100 aa1.51□□□□□ -2.17
LINC02400-202ENST00000552712 KRTAP12-1P59990 96 aa1.51□□□□□ -2.17
LINC02400-202ENST00000552712 MT1XP80297 61 aa1.51□□□□□ -2.17
LINC02400-202ENST00000552712 A0A1B0GU33 70 aa1.5□□□□□ -2.17
LINC02400-202ENST00000552712 KTN1-AS1Q86SY8 53 aa1.5□□□□□ -2.17
LINC02400-202ENST00000552712 R4GN34 69 aa1.5□□□□□ -2.17
LINC02400-202ENST00000552712 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
LINC02400-202ENST00000552712 KRTAP19-6Q3LI70 58 aa1.49□□□□□ -2.17
LINC02400-202ENST00000552712 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
LINC02400-202ENST00000552712 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
LINC02400-202ENST00000552712 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
LINC02400-202ENST00000552712 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
LINC02400-202ENST00000552712 MIR22HGQ0VDD5 57 aa1.45□□□□□ -2.18
LINC02400-202ENST00000552712 KRTAP25-1Q3LHN0 102 aa1.45□□□□□ -2.18
LINC02400-202ENST00000552712 SPINT4Q6UDR6 99 aa1.45□□□□□ -2.18
LINC02400-202ENST00000552712 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
LINC02400-202ENST00000552712 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
LINC02400-202ENST00000552712 A6NN06 94 aa1.43□□□□□ -2.18
LINC02400-202ENST00000552712 UQCR11O14957 56 aa1.43□□□□□ -2.18
LINC02400-202ENST00000552712 BRK1Q8WUW1 75 aa1.43□□□□□ -2.18
LINC02400-202ENST00000552712 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
LINC02400-202ENST00000552712 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
LINC02400-202ENST00000552712 CDC42SE1Q9NRR8 79 aa1.41□□□□□ -2.18
LINC02400-202ENST00000552712 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.19
LINC02400-202ENST00000552712 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
LINC02400-202ENST00000552712 KMT2DO14686 5537 aa1.35□□□□□ -2.19
LINC02400-202ENST00000552712 PRO2289Q9P1D8 64 aa1.35□□□□□ -2.19
LINC02400-202ENST00000552712 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
LINC02400-202ENST00000552712 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
LINC02400-202ENST00000552712 ROMO1P60602 79 aa1.33□□□□□ -2.2
LINC02400-202ENST00000552712 KRTAP8-1Q8IUC2 63 aa1.33□□□□□ -2.2
LINC02400-202ENST00000552712 MT1EP04732 61 aa1.32□□□□□ -2.2
LINC02400-202ENST00000552712 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
LINC02400-202ENST00000552712 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
LINC02400-202ENST00000552712 SPRR2FQ96RM1 72 aa1.31□□□□□ -2.2
LINC02400-202ENST00000552712 NEBP20929 6669 aa1.31□□□□□ -2.2
LINC02400-202ENST00000552712 TNP1P09430 55 aa1.3□□□□□ -2.2
LINC02400-202ENST00000552712 MT1LQ93083 61 aa1.28□□□□□ -2.2
LINC02400-202ENST00000552712 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
LINC02400-202ENST00000552712 SPRR2EP22531 72 aa1.27□□□□□ -2.21
LINC02400-202ENST00000552712 SPRR2BP35325 72 aa1.27□□□□□ -2.21
LINC02400-202ENST00000552712 SPRR2AP35326 72 aa1.27□□□□□ -2.21
LINC02400-202ENST00000552712 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
LINC02400-202ENST00000552712 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
LINC02400-202ENST00000552712 MT1MQ8N339 61 aa1.24□□□□□ -2.21
LINC02400-202ENST00000552712 SPRR2DP22532 72 aa1.22□□□□□ -2.21
LINC02400-202ENST00000552712 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
LINC02400-202ENST00000552712 KRTAP20-1Q3LI63 56 aa1.2□□□□□ -2.22
LINC02400-202ENST00000552712 MT1GP13640 62 aa1.19□□□□□ -2.22
LINC02400-202ENST00000552712 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
LINC02400-202ENST00000552712 KRTAP2-3P0C7H8 128 aa1.13□□□□□ -2.23
LINC02400-202ENST00000552712 KRTAP2-4Q9BYR9 128 aa1.13□□□□□ -2.23
LINC02400-202ENST00000552712 INE1O15225 51 aa1.11□□□□□ -2.23
LINC02400-202ENST00000552712 HMCN1Q96RW7 5635 aa1.1□□□□□ -2.23
LINC02400-202ENST00000552712 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
LINC02400-202ENST00000552712 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
LINC02400-202ENST00000552712 MT4P47944 62 aa1.09□□□□□ -2.23
LINC02400-202ENST00000552712 MT1AP04731 61 aa1.07□□□□□ -2.24
LINC02400-202ENST00000552712 SYNE1Q8NF91 8797 aaKnown RBP1.05□□□□□ -2.24
LINC02400-202ENST00000552712 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
LINC02400-202ENST00000552712 KRTAP12-4P60329 112 aa1.02□□□□□ -2.25
LINC02400-202ENST00000552712 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
LINC02400-202ENST00000552712 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
LINC02400-202ENST00000552712 AHNAK2Q8IVF2 5795 aa0.96□□□□□ -2.26
LINC02400-202ENST00000552712 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
LINC02400-202ENST00000552712 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
LINC02400-202ENST00000552712 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
LINC02400-202ENST00000552712 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
LINC02400-202ENST00000552712 PRM1P04553 51 aa0.73□□□□□ -2.29
LINC02400-202ENST00000552712 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
LINC02400-202ENST00000552712 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
LINC02400-202ENST00000552712 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms