RNA–Protein interactions for RNA: ENST00000552712.1

LINC02400-202, Transcript of long intergenic non-protein coding RNA 2400, humanhuman

TSL 2

Gene LINC02400, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02400-202ENST00000552712 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
LINC02400-202ENST00000552712 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
LINC02400-202ENST00000552712 SENP3Q9H4L4 574 aaPredicted RBP14.59□□□□□ -0.07
LINC02400-202ENST00000552712 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
LINC02400-202ENST00000552712 FOXD1Q16676 465 aa13.56□□□□□ -0.24
LINC02400-202ENST00000552712 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
LINC02400-202ENST00000552712 MSH5O43196 834 aa12.8□□□□□ -0.36
LINC02400-202ENST00000552712 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
LINC02400-202ENST00000552712 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
LINC02400-202ENST00000552712 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
LINC02400-202ENST00000552712 ADRA2BP18089 450 aa12.51□□□□□ -0.41
LINC02400-202ENST00000552712 SCAF1Q9H7N4 1312 aaKnown RBP11.58□□□□□ -0.56
LINC02400-202ENST00000552712 DMRT2Q9Y5R5 561 aa11.55□□□□□ -0.56
LINC02400-202ENST00000552712 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
LINC02400-202ENST00000552712 PPP4R3CPQ6ZMV5 832 aa11.2□□□□□ -0.62
LINC02400-202ENST00000552712 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
LINC02400-202ENST00000552712 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
LINC02400-202ENST00000552712 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
LINC02400-202ENST00000552712 CACNB1Q02641 598 aaPredicted RBP10.97□□□□□ -0.65
LINC02400-202ENST00000552712 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
LINC02400-202ENST00000552712 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
LINC02400-202ENST00000552712 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
LINC02400-202ENST00000552712 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
LINC02400-202ENST00000552712 C1QBPQ07021 282 aaKnown RBP10.76□□□□□ -0.69
LINC02400-202ENST00000552712 NPM3O75607 178 aaKnown RBP10.58□□□□□ -0.72
LINC02400-202ENST00000552712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC02400-202ENST00000552712 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
LINC02400-202ENST00000552712 KCNA4P22459 653 aa10.24□□□□□ -0.77
LINC02400-202ENST00000552712 DSG3P32926 999 aa10.15□□□□□ -0.78
LINC02400-202ENST00000552712 SPINK5Q9NQ38 1064 aaPredicted RBP10.13□□□□□ -0.79
LINC02400-202ENST00000552712 CAPN15O75808 1086 aa10.12□□□□□ -0.79
LINC02400-202ENST00000552712 SLC4A2P04920 1241 aa10.12□□□□□ -0.79
LINC02400-202ENST00000552712 APLP2Q06481 763 aa10.1□□□□□ -0.79
LINC02400-202ENST00000552712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
LINC02400-202ENST00000552712 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
LINC02400-202ENST00000552712 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
LINC02400-202ENST00000552712 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
LINC02400-202ENST00000552712 TRHP20396 242 aaPredicted RBP9.92□□□□□ -0.82
LINC02400-202ENST00000552712 POTEHQ6S545 545 aa9.86□□□□□ -0.83
LINC02400-202ENST00000552712 ABCB7O75027 752 aa9.83□□□□□ -0.84
LINC02400-202ENST00000552712 MYCNP04198 464 aaPredicted RBP9.82□□□□□ -0.84
LINC02400-202ENST00000552712 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
LINC02400-202ENST00000552712 POLA2Q14181 598 aa9.68□□□□□ -0.86
LINC02400-202ENST00000552712 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
LINC02400-202ENST00000552712 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
LINC02400-202ENST00000552712 ZBTB12Q9Y330 459 aaPredicted RBP9.56□□□□□ -0.88
LINC02400-202ENST00000552712 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
LINC02400-202ENST00000552712 CHRDL2Q6WN34 429 aa9.5□□□□□ -0.89
LINC02400-202ENST00000552712 AKT1S1Q96B36 256 aa9.48□□□□□ -0.89
LINC02400-202ENST00000552712 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
LINC02400-202ENST00000552712 ZBTB22O15209 634 aa9.39□□□□□ -0.91
LINC02400-202ENST00000552712 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
LINC02400-202ENST00000552712 OSCARQ8IYS5 282 aa9.32□□□□□ -0.92
LINC02400-202ENST00000552712 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
LINC02400-202ENST00000552712 SPDYE2BA6NHP3 402 aa9.23□□□□□ -0.93
LINC02400-202ENST00000552712 SPDYE6P0CI01 402 aa9.23□□□□□ -0.93
LINC02400-202ENST00000552712 FBLN2P98095 1184 aa9.23□□□□□ -0.93
LINC02400-202ENST00000552712 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
LINC02400-202ENST00000552712 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
LINC02400-202ENST00000552712 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
LINC02400-202ENST00000552712 SP7Q8TDD2 431 aaPredicted RBP9.2□□□□□ -0.94
LINC02400-202ENST00000552712 MKRN4PQ13434 485 aaPredicted RBP9.1□□□□□ -0.95
LINC02400-202ENST00000552712 HAX1O00165 279 aa9.09□□□□□ -0.95
LINC02400-202ENST00000552712 SPDYE1Q8NFV5 336 aaPredicted RBP9.08□□□□□ -0.96
LINC02400-202ENST00000552712 SSUH2Q9Y2M2 353 aa9.08□□□□□ -0.96
LINC02400-202ENST00000552712 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
LINC02400-202ENST00000552712 PRKAR2AP13861 404 aaKnown RBP8.98□□□□□ -0.97
LINC02400-202ENST00000552712 CLEC11AQ9Y240 323 aa8.98□□□□□ -0.97
LINC02400-202ENST00000552712 EVX2Q03828 476 aa8.94□□□□□ -0.98
LINC02400-202ENST00000552712 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
LINC02400-202ENST00000552712 CSRNP3Q8WYN3 585 aa8.91□□□□□ -0.98
LINC02400-202ENST00000552712 PABPN1Q86U42 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC02400-202ENST00000552712 PRR29P0C7W0 189 aa8.88□□□□□ -0.99
LINC02400-202ENST00000552712 CHADLQ6NUI6 762 aa8.8□□□□□ -1
LINC02400-202ENST00000552712 GABBR2O75899 941 aa8.79□□□□□ -1
LINC02400-202ENST00000552712 CLCN6P51797 869 aa8.78□□□□□ -1
LINC02400-202ENST00000552712 FARP1Q9Y4F1 1045 aaPredicted RBP8.74□□□□□ -1.01
LINC02400-202ENST00000552712 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
LINC02400-202ENST00000552712 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
LINC02400-202ENST00000552712 SPDYE4A6NLX3 237 aa8.63□□□□□ -1.03
LINC02400-202ENST00000552712 EHMT2Q96KQ7 1210 aa8.63□□□□□ -1.03
LINC02400-202ENST00000552712 LHX8Q68G74 356 aa8.62□□□□□ -1.03
LINC02400-202ENST00000552712 CREBZFQ9NS37 354 aa8.62□□□□□ -1.03
LINC02400-202ENST00000552712 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
LINC02400-202ENST00000552712 POTEIP0CG38 1075 aa8.58□□□□□ -1.04
LINC02400-202ENST00000552712 NISCHQ9Y2I1 1504 aa8.54□□□□□ -1.04
LINC02400-202ENST00000552712 ZRANB1Q9UGI0 708 aa8.54□□□□□ -1.04
LINC02400-202ENST00000552712 DCBLD2Q96PD2 775 aa8.52□□□□□ -1.05
LINC02400-202ENST00000552712 NPM1P06748 294 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC02400-202ENST00000552712 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
LINC02400-202ENST00000552712 MNX1P50219 401 aaPredicted RBP8.49□□□□□ -1.05
LINC02400-202ENST00000552712 PROM2Q8N271 834 aa8.49□□□□□ -1.05
LINC02400-202ENST00000552712 GALR2O43603 387 aaPredicted RBP8.43□□□□□ -1.06
LINC02400-202ENST00000552712 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
LINC02400-202ENST00000552712 ASTLQ6HA08 431 aaPredicted RBP8.33□□□□□ -1.08
LINC02400-202ENST00000552712 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
LINC02400-202ENST00000552712 OTUD5Q96G74 571 aa8.3□□□□□ -1.08
LINC02400-202ENST00000552712 CCDC61Q9Y6R9 512 aa8.3□□□□□ -1.08
LINC02400-202ENST00000552712 MS4A3Q96HJ5 214 aa8.29□□□□□ -1.08
LINC02400-202ENST00000552712 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms