RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
LETMD1-233ENST00000552433 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
LETMD1-233ENST00000552433 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
LETMD1-233ENST00000552433 KRTAP13-1Q8IUC0 172 aa2.42□□□□□ -2.02
LETMD1-233ENST00000552433 DNAH8Q96JB1 4490 aa2.41□□□□□ -2.02
LETMD1-233ENST00000552433 A0A0D9SG42 100 aa2.41□□□□□ -2.02
LETMD1-233ENST00000552433 RHPN1-AS1Q9BWJ2 59 aa2.4□□□□□ -2.03
LETMD1-233ENST00000552433 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
LETMD1-233ENST00000552433 LPAP08519 4548 aa2.38□□□□□ -2.03
LETMD1-233ENST00000552433 M0QZ58 72 aa2.38□□□□□ -2.03
LETMD1-233ENST00000552433 H3BNG1 76 aa2.33□□□□□ -2.04
LETMD1-233ENST00000552433 A0A096LPF7 62 aa2.32□□□□□ -2.04
LETMD1-233ENST00000552433 DEFB1P60022 68 aa2.31□□□□□ -2.04
LETMD1-233ENST00000552433 HTN1P15515 57 aa2.27□□□□□ -2.05
LETMD1-233ENST00000552433 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
LETMD1-233ENST00000552433 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
LETMD1-233ENST00000552433 LINC01556Q5JQF7 62 aa2.25□□□□□ -2.05
LETMD1-233ENST00000552433 SPINK6Q6UWN8 80 aa2.23□□□□□ -2.05
LETMD1-233ENST00000552433 MACF1Q9UPN3 7388 aaKnown RBP2.21□□□□□ -2.06
LETMD1-233ENST00000552433 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
LETMD1-233ENST00000552433 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
LETMD1-233ENST00000552433 NEBP20929 6669 aa2.18□□□□□ -2.06
LETMD1-233ENST00000552433 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
LETMD1-233ENST00000552433 MT1HP80294 61 aa2.14□□□□□ -2.07
LETMD1-233ENST00000552433 KRTAP20-1Q3LI63 56 aa2.14□□□□□ -2.07
LETMD1-233ENST00000552433 USH2AO75445 5202 aa2.14□□□□□ -2.07
LETMD1-233ENST00000552433 TNP1P09430 55 aa2.13□□□□□ -2.07
LETMD1-233ENST00000552433 M0R2T5 61 aa2.12□□□□□ -2.07
LETMD1-233ENST00000552433 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
LETMD1-233ENST00000552433 A0A096LNI7 61 aa2.08□□□□□ -2.08
LETMD1-233ENST00000552433 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
LETMD1-233ENST00000552433 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
LETMD1-233ENST00000552433 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
LETMD1-233ENST00000552433 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
LETMD1-233ENST00000552433 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
LETMD1-233ENST00000552433 KRTAP2-3P0C7H8 128 aa1.98□□□□□ -2.09
LETMD1-233ENST00000552433 KRTAP2-4Q9BYR9 128 aa1.98□□□□□ -2.09
LETMD1-233ENST00000552433 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
LETMD1-233ENST00000552433 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
LETMD1-233ENST00000552433 KMT2DO14686 5537 aa1.94□□□□□ -2.1
LETMD1-233ENST00000552433 MT2AP02795 61 aa1.9□□□□□ -2.11
LETMD1-233ENST00000552433 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
LETMD1-233ENST00000552433 MT1FP04733 61 aa1.89□□□□□ -2.11
LETMD1-233ENST00000552433 RPS29P62273 56 aaKnown RBP1.87□□□□□ -2.11
LETMD1-233ENST00000552433 SPRR2EP22531 72 aa1.82□□□□□ -2.12
LETMD1-233ENST00000552433 SPRR2BP35325 72 aa1.82□□□□□ -2.12
LETMD1-233ENST00000552433 SPRR2AP35326 72 aa1.82□□□□□ -2.12
LETMD1-233ENST00000552433 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
LETMD1-233ENST00000552433 SPRR2DP22532 72 aa1.76□□□□□ -2.13
LETMD1-233ENST00000552433 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
LETMD1-233ENST00000552433 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
LETMD1-233ENST00000552433 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
LETMD1-233ENST00000552433 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
LETMD1-233ENST00000552433 PRM1P04553 51 aa1.69□□□□□ -2.14
LETMD1-233ENST00000552433 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
LETMD1-233ENST00000552433 MT1BP07438 61 aa1.63□□□□□ -2.15
LETMD1-233ENST00000552433 KRTAP19-8Q3LI54 63 aa1.58□□□□□ -2.16
LETMD1-233ENST00000552433 MT4P47944 62 aa1.56□□□□□ -2.16
LETMD1-233ENST00000552433 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
LETMD1-233ENST00000552433 KRTAP19-3Q7Z4W3 81 aa1.53□□□□□ -2.16
LETMD1-233ENST00000552433 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.16
LETMD1-233ENST00000552433 MT1AP04731 61 aa1.52□□□□□ -2.17
LETMD1-233ENST00000552433 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
LETMD1-233ENST00000552433 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
LETMD1-233ENST00000552433 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
LETMD1-233ENST00000552433 MT1XP80297 61 aa1.45□□□□□ -2.18
LETMD1-233ENST00000552433 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
LETMD1-233ENST00000552433 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
LETMD1-233ENST00000552433 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
LETMD1-233ENST00000552433 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
LETMD1-233ENST00000552433 MT1EP04732 61 aa1.31□□□□□ -2.2
LETMD1-233ENST00000552433 MT1GP13640 62 aa1.29□□□□□ -2.2
LETMD1-233ENST00000552433 KRTAP19-7Q3SYF9 63 aa1.29□□□□□ -2.2
LETMD1-233ENST00000552433 MT1MQ8N339 61 aa1.28□□□□□ -2.2
LETMD1-233ENST00000552433 MT1LQ93083 61 aa1.19□□□□□ -2.22
LETMD1-233ENST00000552433 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
LETMD1-233ENST00000552433 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
LETMD1-233ENST00000552433 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 122.6 ms