RNA–Protein interactions for RNA: ENST00000551692.5

PACS2-211, Transcript of phosphofurin acidic cluster sorting protein 2, human

TSL 2

Gene PACS2, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACS2-211	ENST00000551692	KRTAP4-8	A0A0G2JLE6	195 aa		4.9	□□□□□ -1.63
PACS2-211	ENST00000551692	LCE3C	Q5T5A8	94 aa		4.9	□□□□□ -1.63
PACS2-211	ENST00000551692	KRTAP4-8	Q9BYQ9	185 aa		4.9	□□□□□ -1.63
PACS2-211	ENST00000551692	KRTAP9-6	A8MVA2	160 aa		4.87	□□□□□ -1.63
PACS2-211	ENST00000551692	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.87	□□□□□ -1.63
PACS2-211	ENST00000551692	KRTAP6-3	Q3LI67	103 aa		4.86	□□□□□ -1.63
PACS2-211	ENST00000551692	MT1E	P04732	61 aa		4.85	□□□□□ -1.63
PACS2-211	ENST00000551692	MACF1	Q9UPN3	7388 aa	Known RBP	4.79	□□□□□ -1.64
PACS2-211	ENST00000551692	KRTAP12-4	P60329	112 aa		4.78	□□□□□ -1.64
PACS2-211	ENST00000551692	FSIP2	Q5CZC0	6907 aa		4.76	□□□□□ -1.65
PACS2-211	ENST00000551692	MT1L	Q93083	61 aa		4.73	□□□□□ -1.65
PACS2-211	ENST00000551692	LCE5A	Q5TCM9	118 aa		4.69	□□□□□ -1.66
PACS2-211	ENST00000551692	LCE1A	Q5T7P2	110 aa		4.66	□□□□□ -1.66
PACS2-211	ENST00000551692	KRTAP19-3	Q7Z4W3	81 aa		4.66	□□□□□ -1.66
PACS2-211	ENST00000551692	MT1G	P13640	62 aa		4.63	□□□□□ -1.67
PACS2-211	ENST00000551692	LOC100996750	A0A140TA64	210 aa		4.57	□□□□□ -1.68
PACS2-211	ENST00000551692	SPRR2F	Q96RM1	72 aa		4.57	□□□□□ -1.68
PACS2-211	ENST00000551692	KRTAP2-3	P0C7H8	128 aa		4.56	□□□□□ -1.68
PACS2-211	ENST00000551692	KRTAP2-4	Q9BYR9	128 aa		4.56	□□□□□ -1.68
PACS2-211	ENST00000551692	KRTAP2-1	Q9BYU5	128 aa		4.56	□□□□□ -1.68
PACS2-211	ENST00000551692	KRTAP9-7	A8MTY7	169 aa		4.55	□□□□□ -1.68
PACS2-211	ENST00000551692	MT1M	Q8N339	61 aa		4.55	□□□□□ -1.68
PACS2-211	ENST00000551692	SYNE2	Q8WXH0	6885 aa	Known RBP	4.53	□□□□□ -1.68
PACS2-211	ENST00000551692	KRTAP4-9	Q9BYQ8	210 aa		4.5	□□□□□ -1.69
PACS2-211	ENST00000551692	NEB	P20929	6669 aa		4.46	□□□□□ -1.69
PACS2-211	ENST00000551692	KRTAP4-3	Q9BYR4	195 aa		4.45	□□□□□ -1.7
PACS2-211	ENST00000551692	MUC12	Q9UKN1	5478 aa		4.42	□□□□□ -1.7
PACS2-211	ENST00000551692	SPRR2E	P22531	72 aa		4.41	□□□□□ -1.7
PACS2-211	ENST00000551692	SPRR2B	P35325	72 aa		4.41	□□□□□ -1.7
PACS2-211	ENST00000551692	SPRR2A	P35326	72 aa		4.41	□□□□□ -1.7
PACS2-211	ENST00000551692	LCE3B	Q5TA77	95 aa		4.41	□□□□□ -1.7
PACS2-211	ENST00000551692	MDN1	Q9NU22	5596 aa		4.38	□□□□□ -1.71
PACS2-211	ENST00000551692	MUC19	Q7Z5P9	8384 aa		4.34	□□□□□ -1.71
PACS2-211	ENST00000551692	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.34	□□□□□ -1.72
PACS2-211	ENST00000551692	PRM1	P04553	51 aa		4.33	□□□□□ -1.72
PACS2-211	ENST00000551692	SPRR2D	P22532	72 aa		4.27	□□□□□ -1.73
PACS2-211	ENST00000551692	KRTAP5-4	Q6L8H1	288 aa		4.21	□□□□□ -1.74
PACS2-211	ENST00000551692	LCE1E	Q5T753	118 aa		4.15	□□□□□ -1.75
PACS2-211	ENST00000551692	KRTAP2-2	Q9BYT5	123 aa		4.08	□□□□□ -1.76
PACS2-211	ENST00000551692	LCE3D	Q9BYE3	92 aa		4.06	□□□□□ -1.76
PACS2-211	ENST00000551692	MT1A	P04731	61 aa		4.05	□□□□□ -1.76
PACS2-211	ENST00000551692	KRTAP20-1	Q3LI63	56 aa		4.05	□□□□□ -1.76
PACS2-211	ENST00000551692	LCE4A	Q5TA78	99 aa		4.03	□□□□□ -1.76
PACS2-211	ENST00000551692	LCE3E	Q5T5B0	92 aa		4	□□□□□ -1.77
PACS2-211	ENST00000551692	KRTAP6-1	Q3LI64	71 aa		3.91	□□□□□ -1.78
PACS2-211	ENST00000551692	KRTAP9-4	Q9BYQ2	154 aa		3.87	□□□□□ -1.79
PACS2-211	ENST00000551692	LCE1D	Q5T752	114 aa		3.86	□□□□□ -1.79
PACS2-211	ENST00000551692	KRTAP6-2	Q3LI66	62 aa		3.86	□□□□□ -1.79
PACS2-211	ENST00000551692	KRTAP5-2	Q701N4	177 aa		3.83	□□□□□ -1.8
PACS2-211	ENST00000551692	KRTAP5-3	Q6L8H2	238 aa		3.76	□□□□□ -1.81
PACS2-211	ENST00000551692	KRTAP20-2	Q3LI61	65 aa		3.75	□□□□□ -1.81
PACS2-211	ENST00000551692	KRTAP4-6	Q9BYQ5	205 aa		3.69	□□□□□ -1.82
PACS2-211	ENST00000551692	HMCN1	Q96RW7	5635 aa		3.65	□□□□□ -1.83
PACS2-211	ENST00000551692	MT3	P25713	68 aa		3.6	□□□□□ -1.83
PACS2-211	ENST00000551692	MT4	P47944	62 aa		3.56	□□□□□ -1.84
PACS2-211	ENST00000551692	LCE1F	Q5T754	118 aa		3.45	□□□□□ -1.86
PACS2-211	ENST00000551692	AHNAK2	Q8IVF2	5795 aa		3.38	□□□□□ -1.87
PACS2-211	ENST00000551692	KRTAP4-11	Q9BYQ6	195 aa		3.35	□□□□□ -1.87
PACS2-211	ENST00000551692	KRTAP5-7	Q6L8G8	165 aa		3.33	□□□□□ -1.88
PACS2-211	ENST00000551692	KRTAP5-10	Q6L8G5	202 aa		3.33	□□□□□ -1.88
PACS2-211	ENST00000551692	KRTAP5-8	O75690	187 aa		3.27	□□□□□ -1.89
PACS2-211	ENST00000551692	KRTAP5-1	Q6L8H4	278 aa		3.24	□□□□□ -1.89
PACS2-211	ENST00000551692	LCE1C	Q5T751	118 aa		3.11	□□□□□ -1.91
PACS2-211	ENST00000551692	LCE1B	Q5T7P3	118 aa		3.11	□□□□□ -1.91
PACS2-211	ENST00000551692	KRTAP4-2	Q9BYR5	136 aa		3.06	□□□□□ -1.92
PACS2-211	ENST00000551692	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.04	□□□□□ -1.92
PACS2-211	ENST00000551692	MUC5AC	P98088	5654 aa		3	□□□□□ -1.93
PACS2-211	ENST00000551692	GPR98	Q8WXG9	6306 aa		2.93	□□□□□ -1.94
PACS2-211	ENST00000551692	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.91	□□□□□ -1.94
PACS2-211	ENST00000551692	KRTAP5-11	Q6L8G4	156 aa		2.77	□□□□□ -1.97
PACS2-211	ENST00000551692	KRTAP9-9	Q9BYP9	154 aa		2.76	□□□□□ -1.97
PACS2-211	ENST00000551692	KRTAP4-4	Q9BYR3	166 aa		2.74	□□□□□ -1.97
PACS2-211	ENST00000551692	KRTAP21-2	Q3LI59	83 aa		2.69	□□□□□ -1.98
PACS2-211	ENST00000551692	AHNAK	Q09666	5890 aa	Known RBP	2.6	□□□□□ -1.99
PACS2-211	ENST00000551692	KRTAP4-12	Q9BQ66	201 aa		2.41	□□□□□ -2.02
PACS2-211	ENST00000551692	PHGR1	C9JFL3	82 aa		2.35	□□□□□ -2.03
PACS2-211	ENST00000551692	KRTAP21-1	Q3LI58	79 aa		2.34	□□□□□ -2.04
PACS2-211	ENST00000551692	MUC16	Q8WXI7	14507 aa		1.64	□□□□□ -2.15

Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms