RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 A0A1B0GV90 55 aa2.44□□□□□ -2.02
PRPF40B-214ENST00000551320 H3BPC8 53 aa2.44□□□□□ -2.02
PRPF40B-214ENST00000551320 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
PRPF40B-214ENST00000551320 MT1GP13640 62 aa2.42□□□□□ -2.02
PRPF40B-214ENST00000551320 SEC61GP60059 68 aa2.42□□□□□ -2.02
PRPF40B-214ENST00000551320 SPATA8Q6RVD6 105 aa2.42□□□□□ -2.02
PRPF40B-214ENST00000551320 MT1LQ93083 61 aa2.42□□□□□ -2.02
PRPF40B-214ENST00000551320 SNURFQ9Y675 71 aa2.42□□□□□ -2.02
PRPF40B-214ENST00000551320 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
PRPF40B-214ENST00000551320 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.03
PRPF40B-214ENST00000551320 SPTSSBQ8NFR3 76 aa2.4□□□□□ -2.03
PRPF40B-214ENST00000551320 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
PRPF40B-214ENST00000551320 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
PRPF40B-214ENST00000551320 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
PRPF40B-214ENST00000551320 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
PRPF40B-214ENST00000551320 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
PRPF40B-214ENST00000551320 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
PRPF40B-214ENST00000551320 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
PRPF40B-214ENST00000551320 COA5Q86WW8 74 aa2.3□□□□□ -2.04
PRPF40B-214ENST00000551320 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
PRPF40B-214ENST00000551320 A0A1B0GU33 70 aa2.28□□□□□ -2.04
PRPF40B-214ENST00000551320 J3QR89 54 aa2.27□□□□□ -2.05
PRPF40B-214ENST00000551320 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
PRPF40B-214ENST00000551320 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
PRPF40B-214ENST00000551320 SPANXA2-OT1Q8N9U9 137 aa2.26□□□□□ -2.05
PRPF40B-214ENST00000551320 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
PRPF40B-214ENST00000551320 SERP1Q9Y6X1 66 aa2.26□□□□□ -2.05
PRPF40B-214ENST00000551320 SMIM20Q8N5G0 67 aa2.25□□□□□ -2.05
PRPF40B-214ENST00000551320 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
PRPF40B-214ENST00000551320 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
PRPF40B-214ENST00000551320 TNP1P09430 55 aa2.21□□□□□ -2.06
PRPF40B-214ENST00000551320 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
PRPF40B-214ENST00000551320 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PRPF40B-214ENST00000551320 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
PRPF40B-214ENST00000551320 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
PRPF40B-214ENST00000551320 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
PRPF40B-214ENST00000551320 A0A1B0GU69 56 aa2.15□□□□□ -2.07
PRPF40B-214ENST00000551320 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
PRPF40B-214ENST00000551320 K7ERU9 68 aa2.14□□□□□ -2.07
PRPF40B-214ENST00000551320 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
PRPF40B-214ENST00000551320 H7BZZ5 65 aa2.12□□□□□ -2.07
PRPF40B-214ENST00000551320 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
PRPF40B-214ENST00000551320 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
PRPF40B-214ENST00000551320 COX7CP15954 63 aa2.08□□□□□ -2.08
PRPF40B-214ENST00000551320 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
PRPF40B-214ENST00000551320 MT1AP04731 61 aa2.02□□□□□ -2.09
PRPF40B-214ENST00000551320 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
PRPF40B-214ENST00000551320 LCE1CQ5T751 118 aa2□□□□□ -2.09
PRPF40B-214ENST00000551320 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
PRPF40B-214ENST00000551320 CCDC179H3BU77 68 aa1.99□□□□□ -2.09
PRPF40B-214ENST00000551320 KRTAP25-1Q3LHN0 102 aa1.98□□□□□ -2.09
PRPF40B-214ENST00000551320 PRR15LQ9BU68 103 aa1.96□□□□□ -2.1
PRPF40B-214ENST00000551320 LINC01558Q9Y6Z2 57 aa1.96□□□□□ -2.1
PRPF40B-214ENST00000551320 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
PRPF40B-214ENST00000551320 ANAPC13Q9BS18 74 aa1.94□□□□□ -2.1
PRPF40B-214ENST00000551320 UQCR11O14957 56 aa1.92□□□□□ -2.1
PRPF40B-214ENST00000551320 MIR22HGQ0VDD5 57 aa1.92□□□□□ -2.1
PRPF40B-214ENST00000551320 PSPHP1O15172 72 aa1.91□□□□□ -2.1
PRPF40B-214ENST00000551320 K7ERS5 55 aa1.82□□□□□ -2.12
PRPF40B-214ENST00000551320 ATP5EP56381 51 aaPredicted RBP1.82□□□□□ -2.12
PRPF40B-214ENST00000551320 PRO0628Q9UI54 55 aa1.78□□□□□ -2.12
PRPF40B-214ENST00000551320 RPS28P62857 69 aaKnown RBP1.77□□□□□ -2.13
PRPF40B-214ENST00000551320 Q1T7F1 81 aa1.76□□□□□ -2.13
PRPF40B-214ENST00000551320 TMEM258P61165 79 aa1.75□□□□□ -2.13
PRPF40B-214ENST00000551320 CDC42SE1Q9NRR8 79 aa1.75□□□□□ -2.13
PRPF40B-214ENST00000551320 ROMO1P60602 79 aa1.74□□□□□ -2.13
PRPF40B-214ENST00000551320 V9GYY9 64 aa1.74□□□□□ -2.13
PRPF40B-214ENST00000551320 A6NED7 52 aa1.72□□□□□ -2.13
PRPF40B-214ENST00000551320 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
PRPF40B-214ENST00000551320 PMAIP1Q13794 54 aa1.55□□□□□ -2.16
PRPF40B-214ENST00000551320 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
PRPF40B-214ENST00000551320 KTN1-AS1Q86SY8 53 aa1.44□□□□□ -2.18
PRPF40B-214ENST00000551320 BRK1Q8WUW1 75 aa1.42□□□□□ -2.18
PRPF40B-214ENST00000551320 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PRPF40B-214ENST00000551320 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
PRPF40B-214ENST00000551320 INE1O15225 51 aa1.05□□□□□ -2.24
PRPF40B-214ENST00000551320 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
PRPF40B-214ENST00000551320 PRM1P04553 51 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 135.4 ms