RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CYSTM1Q9H1C7 97 aa1.87□□□□□ -2.11
SCAF11-214ENST00000550893 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
SCAF11-214ENST00000550893 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
SCAF11-214ENST00000550893 R4GN34 69 aa1.86□□□□□ -2.11
SCAF11-214ENST00000550893 SNURFQ9Y675 71 aa1.85□□□□□ -2.11
SCAF11-214ENST00000550893 PRO2289Q9P1D8 64 aa1.84□□□□□ -2.11
SCAF11-214ENST00000550893 MT1EP04732 61 aa1.82□□□□□ -2.12
SCAF11-214ENST00000550893 SPRR2DP22532 72 aa1.82□□□□□ -2.12
SCAF11-214ENST00000550893 LINC01554Q52M75 96 aa1.82□□□□□ -2.12
SCAF11-214ENST00000550893 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
SCAF11-214ENST00000550893 PRO0628Q9UI54 55 aa1.82□□□□□ -2.12
SCAF11-214ENST00000550893 J3QR89 54 aa1.81□□□□□ -2.12
SCAF11-214ENST00000550893 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
SCAF11-214ENST00000550893 C20orf197Q8N268 126 aa1.8□□□□□ -2.12
SCAF11-214ENST00000550893 SPANXA2-OT1Q8N9U9 137 aa1.8□□□□□ -2.12
SCAF11-214ENST00000550893 SMIM26A0A096LP01 95 aa1.79□□□□□ -2.12
SCAF11-214ENST00000550893 SCGB1A1P11684 91 aa1.79□□□□□ -2.12
SCAF11-214ENST00000550893 ACYP2P14621 99 aa1.79□□□□□ -2.12
SCAF11-214ENST00000550893 K7ERU9 68 aa1.78□□□□□ -2.12
SCAF11-214ENST00000550893 SMIM20Q8N5G0 67 aa1.78□□□□□ -2.12
SCAF11-214ENST00000550893 SERP2Q8N6R1 65 aa1.78□□□□□ -2.12
SCAF11-214ENST00000550893 H7BZZ5 65 aa1.77□□□□□ -2.13
SCAF11-214ENST00000550893 PSPHP1O15172 72 aa1.77□□□□□ -2.13
SCAF11-214ENST00000550893 KRTAP12-1P59990 96 aa1.77□□□□□ -2.13
SCAF11-214ENST00000550893 COA5Q86WW8 74 aa1.77□□□□□ -2.13
SCAF11-214ENST00000550893 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
SCAF11-214ENST00000550893 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
SCAF11-214ENST00000550893 PMAIP1Q13794 54 aa1.75□□□□□ -2.13
SCAF11-214ENST00000550893 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
SCAF11-214ENST00000550893 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SCAF11-214ENST00000550893 SPATA8Q6RVD6 105 aa1.74□□□□□ -2.13
SCAF11-214ENST00000550893 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
SCAF11-214ENST00000550893 COX7CP15954 63 aa1.73□□□□□ -2.13
SCAF11-214ENST00000550893 MT1MQ8N339 61 aa1.73□□□□□ -2.13
SCAF11-214ENST00000550893 MT1LQ93083 61 aa1.73□□□□□ -2.13
SCAF11-214ENST00000550893 CHKB-CPT1BH3BT56 60 aa1.71□□□□□ -2.14
SCAF11-214ENST00000550893 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
SCAF11-214ENST00000550893 A0A0D9SG42 100 aa1.7□□□□□ -2.14
SCAF11-214ENST00000550893 SPTSSBQ8NFR3 76 aa1.7□□□□□ -2.14
SCAF11-214ENST00000550893 ANAPC13Q9BS18 74 aa1.7□□□□□ -2.14
SCAF11-214ENST00000550893 CCDC179H3BU77 68 aa1.68□□□□□ -2.14
SCAF11-214ENST00000550893 MT1GP13640 62 aa1.68□□□□□ -2.14
SCAF11-214ENST00000550893 A0A1B0GU33 70 aa1.66□□□□□ -2.14
SCAF11-214ENST00000550893 RPS28P62857 69 aaKnown RBP1.65□□□□□ -2.15
SCAF11-214ENST00000550893 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
SCAF11-214ENST00000550893 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
SCAF11-214ENST00000550893 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
SCAF11-214ENST00000550893 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
SCAF11-214ENST00000550893 MT4P47944 62 aa1.61□□□□□ -2.15
SCAF11-214ENST00000550893 LINC01558Q9Y6Z2 57 aa1.6□□□□□ -2.15
SCAF11-214ENST00000550893 KTN1-AS1Q86SY8 53 aa1.59□□□□□ -2.15
SCAF11-214ENST00000550893 SERP1Q9Y6X1 66 aa1.59□□□□□ -2.15
SCAF11-214ENST00000550893 A0A1B0GU69 56 aa1.58□□□□□ -2.16
SCAF11-214ENST00000550893 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
SCAF11-214ENST00000550893 K7ERS5 55 aa1.56□□□□□ -2.16
SCAF11-214ENST00000550893 TNP1P09430 55 aa1.55□□□□□ -2.16
SCAF11-214ENST00000550893 A6NED7 52 aa1.54□□□□□ -2.16
SCAF11-214ENST00000550893 ATP5EP56381 51 aaPredicted RBP1.54□□□□□ -2.16
SCAF11-214ENST00000550893 TMEM258P61165 79 aa1.53□□□□□ -2.16
SCAF11-214ENST00000550893 BRK1Q8WUW1 75 aa1.51□□□□□ -2.17
SCAF11-214ENST00000550893 PRR15LQ9BU68 103 aa1.49□□□□□ -2.17
SCAF11-214ENST00000550893 KRTAP25-1Q3LHN0 102 aa1.48□□□□□ -2.17
SCAF11-214ENST00000550893 KRTAP6-1Q3LI64 71 aa1.48□□□□□ -2.17
SCAF11-214ENST00000550893 UQCR11O14957 56 aa1.47□□□□□ -2.17
SCAF11-214ENST00000550893 MIR22HGQ0VDD5 57 aa1.46□□□□□ -2.18
SCAF11-214ENST00000550893 Q1T7F1 81 aa1.46□□□□□ -2.18
SCAF11-214ENST00000550893 MT1AP04731 61 aa1.45□□□□□ -2.18
SCAF11-214ENST00000550893 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-214ENST00000550893 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
SCAF11-214ENST00000550893 ROMO1P60602 79 aa1.41□□□□□ -2.18
SCAF11-214ENST00000550893 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
SCAF11-214ENST00000550893 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
SCAF11-214ENST00000550893 CDC42SE1Q9NRR8 79 aa1.32□□□□□ -2.2
SCAF11-214ENST00000550893 INE1O15225 51 aa1.16□□□□□ -2.22
SCAF11-214ENST00000550893 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
SCAF11-214ENST00000550893 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
SCAF11-214ENST00000550893 PRM1P04553 51 aa0.72□□□□□ -2.29
SCAF11-214ENST00000550893 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms