RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 CEP295Q9C0D2 2601 aa0.26□□□□□ -2.37
TSPAN8-205ENST00000550818 MUC17Q685J3 4493 aa0.26□□□□□ -2.37
TSPAN8-205ENST00000550818 BOD1L1Q8NFC6 3051 aa0.26□□□□□ -2.37
TSPAN8-205ENST00000550818 DCHS1Q96JQ0 3298 aa0.26□□□□□ -2.37
TSPAN8-205ENST00000550818 VPS13CQ709C8 3753 aa0.26□□□□□ -2.37
TSPAN8-205ENST00000550818 TLN1Q9Y490 2541 aaKnown RBP0.25□□□□□ -2.37
TSPAN8-205ENST00000550818 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
TSPAN8-205ENST00000550818 SRCAPQ6ZRS2 3230 aa0.25□□□□□ -2.37
TSPAN8-205ENST00000550818 WDFY4Q6ZS81 3184 aa0.24□□□□□ -2.37
TSPAN8-205ENST00000550818 MT1EP04732 61 aa0.24□□□□□ -2.37
TSPAN8-205ENST00000550818 MT1HP80294 61 aa0.24□□□□□ -2.37
TSPAN8-205ENST00000550818 DYNC1H1Q14204 4646 aaKnown RBP0.24□□□□□ -2.37
TSPAN8-205ENST00000550818 CENPEQ02224 2701 aa0.24□□□□□ -2.37
TSPAN8-205ENST00000550818 LRP2P98164 4655 aa0.23□□□□□ -2.37
TSPAN8-205ENST00000550818 MYO9AB2RTY4 2548 aa0.23□□□□□ -2.37
TSPAN8-205ENST00000550818 CEP350Q5VT06 3117 aa0.23□□□□□ -2.37
TSPAN8-205ENST00000550818 LOC400499M0QZD8 3231 aa0.22□□□□□ -2.37
TSPAN8-205ENST00000550818 GOLGB1Q14789 3259 aaKnown RBP0.21□□□□□ -2.38
TSPAN8-205ENST00000550818 MT1LQ93083 61 aa0.21□□□□□ -2.38
TSPAN8-205ENST00000550818 CFAP47Q6ZTR5 3102 aa0.21□□□□□ -2.38
TSPAN8-205ENST00000550818 SPEGQ15772 3267 aa0.21□□□□□ -2.38
TSPAN8-205ENST00000550818 VCANP13611 3396 aa0.2□□□□□ -2.38
TSPAN8-205ENST00000550818 UTRNP46939 3433 aa0.19□□□□□ -2.38
TSPAN8-205ENST00000550818 VPS13AQ96RL7 3174 aa0.19□□□□□ -2.38
TSPAN8-205ENST00000550818 UNC80Q8N2C7 3258 aa0.19□□□□□ -2.38
TSPAN8-205ENST00000550818 EYSQ5T1H1 3165 aa0.18□□□□□ -2.38
TSPAN8-205ENST00000550818 USP34Q70CQ2 3546 aa0.18□□□□□ -2.38
TSPAN8-205ENST00000550818 EP400Q96L91 3159 aa0.18□□□□□ -2.38
TSPAN8-205ENST00000550818 PCNTO95613 3336 aa0.18□□□□□ -2.38
TSPAN8-205ENST00000550818 ASPMQ8IZT6 3477 aa0.18□□□□□ -2.38
TSPAN8-205ENST00000550818 HERC1Q15751 4861 aa0.17□□□□□ -2.38
TSPAN8-205ENST00000550818 MYO15AQ9UKN7 3530 aa0.16□□□□□ -2.38
TSPAN8-205ENST00000550818 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
TSPAN8-205ENST00000550818 WDFY3Q8IZQ1 3526 aa0.16□□□□□ -2.38
TSPAN8-205ENST00000550818 CENPFP49454 3210 aa0.16□□□□□ -2.38
TSPAN8-205ENST00000550818 STARD9Q9P2P6 4700 aa0.15□□□□□ -2.38
TSPAN8-205ENST00000550818 MT1XP80297 61 aa0.15□□□□□ -2.39
TSPAN8-205ENST00000550818 KRTAP19-8Q3LI54 63 aa0.14□□□□□ -2.39
TSPAN8-205ENST00000550818 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
TSPAN8-205ENST00000550818 DNAH14Q0VDD8 3507 aa0.13□□□□□ -2.39
TSPAN8-205ENST00000550818 BRCA2P51587 3418 aa0.13□□□□□ -2.39
TSPAN8-205ENST00000550818 MT1GP13640 62 aa0.13□□□□□ -2.39
TSPAN8-205ENST00000550818 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
TSPAN8-205ENST00000550818 PCLOQ9Y6V0 5065 aa0.13□□□□□ -2.39
TSPAN8-205ENST00000550818 CDH23Q9H251 3354 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 MT2AP02795 61 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 MT1FP04733 61 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 MT1BP07438 61 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 MT1HL1P0DM35 61 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 MT1MQ8N339 61 aa0.12□□□□□ -2.39
TSPAN8-205ENST00000550818 DNHD1Q96M86 4753 aa0.11□□□□□ -2.39
TSPAN8-205ENST00000550818 KRTAP19-2Q3LHN2 52 aa0.11□□□□□ -2.39
TSPAN8-205ENST00000550818 KRTAP6-1Q3LI64 71 aa0.11□□□□□ -2.39
TSPAN8-205ENST00000550818 RYR1P21817 5038 aa0.09□□□□□ -2.39
TSPAN8-205ENST00000550818 USH2AO75445 5202 aa0.09□□□□□ -2.4
TSPAN8-205ENST00000550818 UBR4Q5T4S7 5183 aa0.07□□□□□ -2.4
TSPAN8-205ENST00000550818 MUC2Q02817 5179 aa0.06□□□□□ -2.4
TSPAN8-205ENST00000550818 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
TSPAN8-205ENST00000550818 KRTAP19-6Q3LI70 58 aa0.05□□□□□ -2.4
TSPAN8-205ENST00000550818 RYR3Q15413 4870 aa0.04□□□□□ -2.4
TSPAN8-205ENST00000550818 MT4P47944 62 aa0.04□□□□□ -2.4
TSPAN8-205ENST00000550818 HERC2O95714 4834 aa0.04□□□□□ -2.4
TSPAN8-205ENST00000550818 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.4
TSPAN8-205ENST00000550818 KRTAP20-1Q3LI63 56 aa0.03□□□□□ -2.4
TSPAN8-205ENST00000550818 GPR98Q8WXG9 6306 aa0□□□□□ -2.41
TSPAN8-205ENST00000550818 MUC12Q9UKN1 5478 aa0□□□□□ -2.41
TSPAN8-205ENST00000550818 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
TSPAN8-205ENST00000550818 HYDINQ4G0P3 5121 aa-0.02□□□□□ -2.41
TSPAN8-205ENST00000550818 SYNE2Q8WXH0 6885 aaKnown RBP-0.03□□□□□ -2.41
TSPAN8-205ENST00000550818 KIAA1109Q2LD37 5005 aa-0.04□□□□□ -2.42
TSPAN8-205ENST00000550818 EPPK1P58107 5090 aaKnown RBP-0.04□□□□□ -2.42
TSPAN8-205ENST00000550818 RYR2Q92736 4967 aa-0.04□□□□□ -2.42
TSPAN8-205ENST00000550818 RNF213Q63HN8 5207 aa-0.04□□□□□ -2.42
TSPAN8-205ENST00000550818 ABCA13Q86UQ4 5058 aa-0.05□□□□□ -2.42
TSPAN8-205ENST00000550818 MACF1Q9UPN3 7388 aaKnown RBP-0.07□□□□□ -2.42
TSPAN8-205ENST00000550818 FSIP2Q5CZC0 6907 aa-0.08□□□□□ -2.42
TSPAN8-205ENST00000550818 NEBP20929 6669 aa-0.13□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 55.7 ms