RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 SMR3BP02814 79 aaPredicted RBP1.4□□□□□ -2.19
LETMD1-226ENST00000550755 RYR1P21817 5038 aa1.39□□□□□ -2.19
LETMD1-226ENST00000550755 RYR3Q15413 4870 aa1.39□□□□□ -2.19
LETMD1-226ENST00000550755 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
LETMD1-226ENST00000550755 C9orf92A6NGG3 77 aa1.37□□□□□ -2.19
LETMD1-226ENST00000550755 MT1HL1P0DM35 61 aa1.36□□□□□ -2.19
LETMD1-226ENST00000550755 KIAA1109Q2LD37 5005 aa1.35□□□□□ -2.19
LETMD1-226ENST00000550755 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
LETMD1-226ENST00000550755 LRP2P98164 4655 aa1.33□□□□□ -2.2
LETMD1-226ENST00000550755 EPPK1P58107 5090 aaKnown RBP1.32□□□□□ -2.2
LETMD1-226ENST00000550755 LPAP08519 4548 aa1.32□□□□□ -2.2
LETMD1-226ENST00000550755 S4R3F8 94 aa1.3□□□□□ -2.2
LETMD1-226ENST00000550755 HERC2O95714 4834 aa1.28□□□□□ -2.21
LETMD1-226ENST00000550755 BIRC6Q9NR09 4857 aa1.27□□□□□ -2.21
LETMD1-226ENST00000550755 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
LETMD1-226ENST00000550755 ABCA13Q86UQ4 5058 aa1.25□□□□□ -2.21
LETMD1-226ENST00000550755 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
LETMD1-226ENST00000550755 M0QZ58 72 aa1.25□□□□□ -2.21
LETMD1-226ENST00000550755 HERC1Q15751 4861 aa1.24□□□□□ -2.21
LETMD1-226ENST00000550755 HMCN2Q8NDA2 5059 aa1.21□□□□□ -2.22
LETMD1-226ENST00000550755 PCLOQ9Y6V0 5065 aa1.21□□□□□ -2.22
LETMD1-226ENST00000550755 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
LETMD1-226ENST00000550755 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
LETMD1-226ENST00000550755 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
LETMD1-226ENST00000550755 MUC2Q02817 5179 aa1.15□□□□□ -2.23
LETMD1-226ENST00000550755 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.23
LETMD1-226ENST00000550755 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
LETMD1-226ENST00000550755 MT1HP80294 61 aa1.13□□□□□ -2.23
LETMD1-226ENST00000550755 MT2AP02795 61 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 MT1FP04733 61 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 KRTAP19-8Q3LI54 63 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 RNF213Q63HN8 5207 aa1.11□□□□□ -2.23
LETMD1-226ENST00000550755 TNP1P09430 55 aa1.1□□□□□ -2.23
LETMD1-226ENST00000550755 UBR4Q5T4S7 5183 aa1.1□□□□□ -2.23
LETMD1-226ENST00000550755 MT1BP07438 61 aa1.08□□□□□ -2.24
LETMD1-226ENST00000550755 M0R2T5 61 aa1.07□□□□□ -2.24
LETMD1-226ENST00000550755 MT1XP80297 61 aa1.06□□□□□ -2.24
LETMD1-226ENST00000550755 KRTAP8-1Q8IUC2 63 aa1.05□□□□□ -2.24
LETMD1-226ENST00000550755 USH2AO75445 5202 aa0.96□□□□□ -2.26
LETMD1-226ENST00000550755 PRM1P04553 51 aa0.95□□□□□ -2.26
LETMD1-226ENST00000550755 KRTAP19-6Q3LI70 58 aa0.95□□□□□ -2.26
LETMD1-226ENST00000550755 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
LETMD1-226ENST00000550755 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
LETMD1-226ENST00000550755 SSPOA2VEC9 5147 aa0.93□□□□□ -2.26
LETMD1-226ENST00000550755 MT1EP04732 61 aa0.92□□□□□ -2.26
LETMD1-226ENST00000550755 MT1LQ93083 61 aa0.92□□□□□ -2.26
LETMD1-226ENST00000550755 KMT2DO14686 5537 aa0.91□□□□□ -2.26
LETMD1-226ENST00000550755 MT1MQ8N339 61 aa0.86□□□□□ -2.27
LETMD1-226ENST00000550755 MT1GP13640 62 aa0.85□□□□□ -2.27
LETMD1-226ENST00000550755 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
LETMD1-226ENST00000550755 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
LETMD1-226ENST00000550755 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
LETMD1-226ENST00000550755 MACF1Q9UPN3 7388 aaKnown RBP0.78□□□□□ -2.28
LETMD1-226ENST00000550755 MT1AP04731 61 aa0.78□□□□□ -2.28
LETMD1-226ENST00000550755 FSIP2Q5CZC0 6907 aa0.78□□□□□ -2.29
LETMD1-226ENST00000550755 SPRR2DP22532 72 aa0.77□□□□□ -2.29
LETMD1-226ENST00000550755 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
LETMD1-226ENST00000550755 SPRR2EP22531 72 aa0.75□□□□□ -2.29
LETMD1-226ENST00000550755 SPRR2BP35325 72 aa0.75□□□□□ -2.29
LETMD1-226ENST00000550755 SPRR2AP35326 72 aa0.75□□□□□ -2.29
LETMD1-226ENST00000550755 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
LETMD1-226ENST00000550755 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
LETMD1-226ENST00000550755 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
LETMD1-226ENST00000550755 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
LETMD1-226ENST00000550755 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
LETMD1-226ENST00000550755 NEBP20929 6669 aa0.66□□□□□ -2.3
LETMD1-226ENST00000550755 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
LETMD1-226ENST00000550755 KRTAP20-1Q3LI63 56 aa0.64□□□□□ -2.31
LETMD1-226ENST00000550755 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
LETMD1-226ENST00000550755 MT4P47944 62 aa0.61□□□□□ -2.31
LETMD1-226ENST00000550755 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
LETMD1-226ENST00000550755 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
LETMD1-226ENST00000550755 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
LETMD1-226ENST00000550755 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
LETMD1-226ENST00000550755 GPR98Q8WXG9 6306 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 57.1 ms