RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 SPRR2FQ96RM1 72 aa6.8□□□□□ -1.32
KRT18-207ENST00000550600 A0A0A0MQY5 61 aa6.76□□□□□ -1.33
KRT18-207ENST00000550600 MT1GP13640 62 aa6.76□□□□□ -1.33
KRT18-207ENST00000550600 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
KRT18-207ENST00000550600 MACF1Q9UPN3 7388 aaKnown RBP6.75□□□□□ -1.33
KRT18-207ENST00000550600 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
KRT18-207ENST00000550600 KRTAP5-9P26371 169 aa6.7□□□□□ -1.34
KRT18-207ENST00000550600 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
KRT18-207ENST00000550600 MT1MQ8N339 61 aa6.61□□□□□ -1.35
KRT18-207ENST00000550600 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
KRT18-207ENST00000550600 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
KRT18-207ENST00000550600 KRTAP6-3Q3LI67 103 aa6.53□□□□□ -1.36
KRT18-207ENST00000550600 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
KRT18-207ENST00000550600 LCE1AQ5T7P2 110 aa6.47□□□□□ -1.37
KRT18-207ENST00000550600 SPRR2EP22531 72 aa6.41□□□□□ -1.38
KRT18-207ENST00000550600 SPRR2BP35325 72 aa6.41□□□□□ -1.38
KRT18-207ENST00000550600 SPRR2AP35326 72 aa6.41□□□□□ -1.38
KRT18-207ENST00000550600 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
KRT18-207ENST00000550600 NEBP20929 6669 aa6.34□□□□□ -1.4
KRT18-207ENST00000550600 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
KRT18-207ENST00000550600 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
KRT18-207ENST00000550600 INE1O15225 51 aa6.2□□□□□ -1.42
KRT18-207ENST00000550600 SPRR2DP22532 72 aa6.18□□□□□ -1.42
KRT18-207ENST00000550600 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
KRT18-207ENST00000550600 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
KRT18-207ENST00000550600 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
KRT18-207ENST00000550600 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
KRT18-207ENST00000550600 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
KRT18-207ENST00000550600 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
KRT18-207ENST00000550600 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
KRT18-207ENST00000550600 MT1AP04731 61 aa5.91□□□□□ -1.46
KRT18-207ENST00000550600 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
KRT18-207ENST00000550600 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
KRT18-207ENST00000550600 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
KRT18-207ENST00000550600 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
KRT18-207ENST00000550600 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
KRT18-207ENST00000550600 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
KRT18-207ENST00000550600 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
KRT18-207ENST00000550600 MT3P25713 68 aa5.38□□□□□ -1.55
KRT18-207ENST00000550600 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
KRT18-207ENST00000550600 MT4P47944 62 aa5.31□□□□□ -1.56
KRT18-207ENST00000550600 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
KRT18-207ENST00000550600 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
KRT18-207ENST00000550600 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
KRT18-207ENST00000550600 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
KRT18-207ENST00000550600 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
KRT18-207ENST00000550600 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
KRT18-207ENST00000550600 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
KRT18-207ENST00000550600 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
KRT18-207ENST00000550600 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
KRT18-207ENST00000550600 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
KRT18-207ENST00000550600 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
KRT18-207ENST00000550600 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
KRT18-207ENST00000550600 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
KRT18-207ENST00000550600 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
KRT18-207ENST00000550600 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
KRT18-207ENST00000550600 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
KRT18-207ENST00000550600 PRM1P04553 51 aa4.5□□□□□ -1.69
KRT18-207ENST00000550600 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
KRT18-207ENST00000550600 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
KRT18-207ENST00000550600 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
KRT18-207ENST00000550600 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
KRT18-207ENST00000550600 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
KRT18-207ENST00000550600 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
KRT18-207ENST00000550600 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
KRT18-207ENST00000550600 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
KRT18-207ENST00000550600 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
KRT18-207ENST00000550600 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
KRT18-207ENST00000550600 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
KRT18-207ENST00000550600 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
KRT18-207ENST00000550600 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
KRT18-207ENST00000550600 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
KRT18-207ENST00000550600 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
KRT18-207ENST00000550600 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
KRT18-207ENST00000550600 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
KRT18-207ENST00000550600 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.97
KRT18-207ENST00000550600 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms