RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
NR4A1-212ENST00000549102 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
NR4A1-212ENST00000549102 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
NR4A1-212ENST00000549102 V9GYY9 64 aa5.23□□□□□ -1.57
NR4A1-212ENST00000549102 PSPHP1O15172 72 aa5.21□□□□□ -1.58
NR4A1-212ENST00000549102 K7ERS5 55 aa5.2□□□□□ -1.58
NR4A1-212ENST00000549102 Q1T7F1 81 aa5.19□□□□□ -1.58
NR4A1-212ENST00000549102 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
NR4A1-212ENST00000549102 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
NR4A1-212ENST00000549102 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
NR4A1-212ENST00000549102 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
NR4A1-212ENST00000549102 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
NR4A1-212ENST00000549102 MT4P47944 62 aa5.11□□□□□ -1.59
NR4A1-212ENST00000549102 KRTAP5-4Q6L8H1 288 aa5.08□□□□□ -1.6
NR4A1-212ENST00000549102 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
NR4A1-212ENST00000549102 A6NED7 52 aa5.04□□□□□ -1.6
NR4A1-212ENST00000549102 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
NR4A1-212ENST00000549102 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
NR4A1-212ENST00000549102 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
NR4A1-212ENST00000549102 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
NR4A1-212ENST00000549102 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
NR4A1-212ENST00000549102 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
NR4A1-212ENST00000549102 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
NR4A1-212ENST00000549102 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
NR4A1-212ENST00000549102 PCP4P48539 62 aa4.87□□□□□ -1.63
NR4A1-212ENST00000549102 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
NR4A1-212ENST00000549102 ROMO1P60602 79 aa4.85□□□□□ -1.63
NR4A1-212ENST00000549102 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
NR4A1-212ENST00000549102 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
NR4A1-212ENST00000549102 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
NR4A1-212ENST00000549102 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
NR4A1-212ENST00000549102 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
NR4A1-212ENST00000549102 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
NR4A1-212ENST00000549102 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
NR4A1-212ENST00000549102 MT1AP04731 61 aa4.58□□□□□ -1.68
NR4A1-212ENST00000549102 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
NR4A1-212ENST00000549102 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
NR4A1-212ENST00000549102 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
NR4A1-212ENST00000549102 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
NR4A1-212ENST00000549102 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
NR4A1-212ENST00000549102 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
NR4A1-212ENST00000549102 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
NR4A1-212ENST00000549102 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
NR4A1-212ENST00000549102 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
NR4A1-212ENST00000549102 MT3P25713 68 aa4.19□□□□□ -1.74
NR4A1-212ENST00000549102 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
NR4A1-212ENST00000549102 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
NR4A1-212ENST00000549102 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
NR4A1-212ENST00000549102 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
NR4A1-212ENST00000549102 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
NR4A1-212ENST00000549102 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
NR4A1-212ENST00000549102 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
NR4A1-212ENST00000549102 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
NR4A1-212ENST00000549102 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
NR4A1-212ENST00000549102 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
NR4A1-212ENST00000549102 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
NR4A1-212ENST00000549102 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
NR4A1-212ENST00000549102 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
NR4A1-212ENST00000549102 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
NR4A1-212ENST00000549102 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
NR4A1-212ENST00000549102 SVIPQ8NHG7 77 aa3.47□□□□□ -1.85
NR4A1-212ENST00000549102 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
NR4A1-212ENST00000549102 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
NR4A1-212ENST00000549102 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
NR4A1-212ENST00000549102 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
NR4A1-212ENST00000549102 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
NR4A1-212ENST00000549102 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
NR4A1-212ENST00000549102 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
NR4A1-212ENST00000549102 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
NR4A1-212ENST00000549102 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
NR4A1-212ENST00000549102 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
NR4A1-212ENST00000549102 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
NR4A1-212ENST00000549102 PRM1P04553 51 aa2.48□□□□□ -2.01
NR4A1-212ENST00000549102 A0A0A0MQY5 61 aa2.26□□□□□ -2.05
NR4A1-212ENST00000549102 INE1O15225 51 aa2.2□□□□□ -2.06
NR4A1-212ENST00000549102 H3BS24 57 aa2.19□□□□□ -2.06
NR4A1-212ENST00000549102 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
NR4A1-212ENST00000549102 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 89.8 ms