RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 KRTAP5-1Q6L8H4 278 aa0.72□□□□□ -2.29
LGR5-205ENST00000549015 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
LGR5-205ENST00000549015 C10orf95Q9H7T3 257 aa0.72□□□□□ -2.29
LGR5-205ENST00000549015 M0R2T5 61 aa0.71□□□□□ -2.3
LGR5-205ENST00000549015 KRTAP5-8O75690 187 aa0.71□□□□□ -2.3
LGR5-205ENST00000549015 PRO2289Q9P1D8 64 aa0.71□□□□□ -2.3
LGR5-205ENST00000549015 MUC2Q02817 5179 aa0.7□□□□□ -2.3
LGR5-205ENST00000549015 MT2AP02795 61 aa0.7□□□□□ -2.3
LGR5-205ENST00000549015 UBR4Q5T4S7 5183 aa0.69□□□□□ -2.3
LGR5-205ENST00000549015 SPRR5A0A1B0GTR4 108 aa0.69□□□□□ -2.3
LGR5-205ENST00000549015 MT1FP04733 61 aa0.69□□□□□ -2.3
LGR5-205ENST00000549015 KRTAP10-10P60014 251 aa0.69□□□□□ -2.3
LGR5-205ENST00000549015 KRTAP10-7P60409 375 aaPredicted RBP0.69□□□□□ -2.3
LGR5-205ENST00000549015 MT1BP07438 61 aa0.68□□□□□ -2.3
LGR5-205ENST00000549015 LCE1EQ5T753 118 aa0.68□□□□□ -2.3
LGR5-205ENST00000549015 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
LGR5-205ENST00000549015 MT1XP80297 61 aa0.67□□□□□ -2.3
LGR5-205ENST00000549015 RNF213Q63HN8 5207 aa0.66□□□□□ -2.3
LGR5-205ENST00000549015 OBSCNQ5VST9 7968 aa0.66□□□□□ -2.3
LGR5-205ENST00000549015 LCE3DQ9BYE3 92 aa0.66□□□□□ -2.3
LGR5-205ENST00000549015 KRTAP9-6A8MVA2 160 aa0.65□□□□□ -2.31
LGR5-205ENST00000549015 KRTAP12-3P60328 96 aa0.65□□□□□ -2.31
LGR5-205ENST00000549015 LCE3AQ5TA76 89 aa0.65□□□□□ -2.31
LGR5-205ENST00000549015 KRTAP19-6Q3LI70 58 aa0.62□□□□□ -2.31
LGR5-205ENST00000549015 KRTAP5-5Q701N2 237 aaPredicted RBP0.61□□□□□ -2.31
LGR5-205ENST00000549015 INE1O15225 51 aa0.6□□□□□ -2.31
LGR5-205ENST00000549015 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
LGR5-205ENST00000549015 KRTAP4-3Q9BYR4 195 aa0.6□□□□□ -2.31
LGR5-205ENST00000549015 MT1EP04732 61 aa0.59□□□□□ -2.31
LGR5-205ENST00000549015 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
LGR5-205ENST00000549015 SSPOA2VEC9 5147 aa0.58□□□□□ -2.32
LGR5-205ENST00000549015 KRTAP6-3Q3LI67 103 aa0.58□□□□□ -2.32
LGR5-205ENST00000549015 MT1LQ93083 61 aa0.58□□□□□ -2.32
LGR5-205ENST00000549015 USH2AO75445 5202 aa0.57□□□□□ -2.32
LGR5-205ENST00000549015 MT1GP13640 62 aa0.57□□□□□ -2.32
LGR5-205ENST00000549015 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
LGR5-205ENST00000549015 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
LGR5-205ENST00000549015 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
LGR5-205ENST00000549015 KRTAP2-1Q9BYU5 128 aa0.56□□□□□ -2.32
LGR5-205ENST00000549015 MT1MQ8N339 61 aa0.55□□□□□ -2.32
LGR5-205ENST00000549015 MACF1Q9UPN3 7388 aaKnown RBP0.55□□□□□ -2.32
LGR5-205ENST00000549015 SPRR2FQ96RM1 72 aa0.53□□□□□ -2.32
LGR5-205ENST00000549015 CRCT1Q9UGL9 99 aa0.52□□□□□ -2.33
LGR5-205ENST00000549015 FSIP2Q5CZC0 6907 aa0.52□□□□□ -2.33
LGR5-205ENST00000549015 MT1AP04731 61 aa0.51□□□□□ -2.33
LGR5-205ENST00000549015 KRTAP12-4P60329 112 aa0.51□□□□□ -2.33
LGR5-205ENST00000549015 FCGBPQ9Y6R7 5405 aaPredicted RBP0.51□□□□□ -2.33
LGR5-205ENST00000549015 KMT2DO14686 5537 aa0.51□□□□□ -2.33
LGR5-205ENST00000549015 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
LGR5-205ENST00000549015 SPRR2EP22531 72 aa0.49□□□□□ -2.33
LGR5-205ENST00000549015 SPRR2BP35325 72 aa0.49□□□□□ -2.33
LGR5-205ENST00000549015 SPRR2AP35326 72 aa0.49□□□□□ -2.33
LGR5-205ENST00000549015 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
LGR5-205ENST00000549015 NEBP20929 6669 aa0.48□□□□□ -2.33
LGR5-205ENST00000549015 SPRR2DP22532 72 aa0.48□□□□□ -2.33
LGR5-205ENST00000549015 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
LGR5-205ENST00000549015 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
LGR5-205ENST00000549015 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
LGR5-205ENST00000549015 LCE1CQ5T751 118 aa0.47□□□□□ -2.33
LGR5-205ENST00000549015 LCE1BQ5T7P3 118 aa0.47□□□□□ -2.33
LGR5-205ENST00000549015 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
LGR5-205ENST00000549015 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
LGR5-205ENST00000549015 DSTQ03001 7570 aaKnown RBP0.44□□□□□ -2.34
LGR5-205ENST00000549015 KRTAP20-1Q3LI63 56 aa0.43□□□□□ -2.34
LGR5-205ENST00000549015 KRTAP6-2Q3LI66 62 aa0.43□□□□□ -2.34
LGR5-205ENST00000549015 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
LGR5-205ENST00000549015 PRM1P04553 51 aa0.4□□□□□ -2.35
LGR5-205ENST00000549015 KRTAP5-7Q6L8G8 165 aa0.4□□□□□ -2.35
LGR5-205ENST00000549015 MT4P47944 62 aa0.38□□□□□ -2.35
LGR5-205ENST00000549015 KRTAP5-10Q6L8G5 202 aa0.38□□□□□ -2.35
LGR5-205ENST00000549015 GPR98Q8WXG9 6306 aa0.37□□□□□ -2.35
LGR5-205ENST00000549015 MUC19Q7Z5P9 8384 aa0.35□□□□□ -2.35
LGR5-205ENST00000549015 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
LGR5-205ENST00000549015 AHNAK2Q8IVF2 5795 aa0.34□□□□□ -2.36
LGR5-205ENST00000549015 KRTAP21-2Q3LI59 83 aa0.32□□□□□ -2.36
LGR5-205ENST00000549015 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
LGR5-205ENST00000549015 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
LGR5-205ENST00000549015 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 48.3 ms