RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
NPAS3-206ENST00000548645 KRTAP19-6Q3LI70 58 aa7.61□□□□□ -1.19
NPAS3-206ENST00000548645 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
NPAS3-206ENST00000548645 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
NPAS3-206ENST00000548645 MT1GP13640 62 aa7.35□□□□□ -1.23
NPAS3-206ENST00000548645 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
NPAS3-206ENST00000548645 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
NPAS3-206ENST00000548645 KRTAP12-4P60329 112 aa7.31□□□□□ -1.24
NPAS3-206ENST00000548645 MUC12Q9UKN1 5478 aa7.28□□□□□ -1.24
NPAS3-206ENST00000548645 MT1MQ8N339 61 aa7.24□□□□□ -1.25
NPAS3-206ENST00000548645 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
NPAS3-206ENST00000548645 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
NPAS3-206ENST00000548645 KRTAP19-3Q7Z4W3 81 aa7.19□□□□□ -1.26
NPAS3-206ENST00000548645 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
NPAS3-206ENST00000548645 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
NPAS3-206ENST00000548645 DSTQ03001 7570 aaKnown RBP6.92□□□□□ -1.3
NPAS3-206ENST00000548645 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
NPAS3-206ENST00000548645 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
NPAS3-206ENST00000548645 MT1AP04731 61 aa6.84□□□□□ -1.31
NPAS3-206ENST00000548645 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
NPAS3-206ENST00000548645 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
NPAS3-206ENST00000548645 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
NPAS3-206ENST00000548645 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
NPAS3-206ENST00000548645 LCE3DQ9BYE3 92 aa6.68□□□□□ -1.34
NPAS3-206ENST00000548645 KRTAP6-1Q3LI64 71 aa6.65□□□□□ -1.34
NPAS3-206ENST00000548645 LCE3EQ5T5B0 92 aa6.63□□□□□ -1.35
NPAS3-206ENST00000548645 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
NPAS3-206ENST00000548645 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
NPAS3-206ENST00000548645 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
NPAS3-206ENST00000548645 SPRR2EP22531 72 aa6.52□□□□□ -1.37
NPAS3-206ENST00000548645 SPRR2BP35325 72 aa6.52□□□□□ -1.37
NPAS3-206ENST00000548645 SPRR2AP35326 72 aa6.52□□□□□ -1.37
NPAS3-206ENST00000548645 PRM1P04553 51 aa6.51□□□□□ -1.37
NPAS3-206ENST00000548645 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
NPAS3-206ENST00000548645 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
NPAS3-206ENST00000548645 SPRR2DP22532 72 aa6.25□□□□□ -1.41
NPAS3-206ENST00000548645 KRTAP6-2Q3LI66 62 aa6.19□□□□□ -1.42
NPAS3-206ENST00000548645 NEBP20929 6669 aa6.17□□□□□ -1.42
NPAS3-206ENST00000548645 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
NPAS3-206ENST00000548645 MT3P25713 68 aa5.91□□□□□ -1.46
NPAS3-206ENST00000548645 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
NPAS3-206ENST00000548645 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
NPAS3-206ENST00000548645 MT4P47944 62 aa5.58□□□□□ -1.52
NPAS3-206ENST00000548645 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
NPAS3-206ENST00000548645 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
NPAS3-206ENST00000548645 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
NPAS3-206ENST00000548645 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
NPAS3-206ENST00000548645 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
NPAS3-206ENST00000548645 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
NPAS3-206ENST00000548645 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
NPAS3-206ENST00000548645 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
NPAS3-206ENST00000548645 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
NPAS3-206ENST00000548645 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
NPAS3-206ENST00000548645 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
NPAS3-206ENST00000548645 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
NPAS3-206ENST00000548645 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
NPAS3-206ENST00000548645 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
NPAS3-206ENST00000548645 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
NPAS3-206ENST00000548645 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
NPAS3-206ENST00000548645 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
NPAS3-206ENST00000548645 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
NPAS3-206ENST00000548645 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
NPAS3-206ENST00000548645 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
NPAS3-206ENST00000548645 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
NPAS3-206ENST00000548645 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
NPAS3-206ENST00000548645 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
NPAS3-206ENST00000548645 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
NPAS3-206ENST00000548645 KRTAP21-1Q3LI58 79 aa4.15□□□□□ -1.75
NPAS3-206ENST00000548645 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
NPAS3-206ENST00000548645 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
NPAS3-206ENST00000548645 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
NPAS3-206ENST00000548645 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
NPAS3-206ENST00000548645 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
NPAS3-206ENST00000548645 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
NPAS3-206ENST00000548645 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
NPAS3-206ENST00000548645 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
NPAS3-206ENST00000548645 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms