RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
CNOT2-209ENST00000548159 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
CNOT2-209ENST00000548159 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
CNOT2-209ENST00000548159 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
CNOT2-209ENST00000548159 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
CNOT2-209ENST00000548159 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
CNOT2-209ENST00000548159 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
CNOT2-209ENST00000548159 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
CNOT2-209ENST00000548159 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.56
CNOT2-209ENST00000548159 MT1GP13640 62 aa5.26□□□□□ -1.57
CNOT2-209ENST00000548159 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
CNOT2-209ENST00000548159 MT1MQ8N339 61 aa5.22□□□□□ -1.57
CNOT2-209ENST00000548159 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
CNOT2-209ENST00000548159 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
CNOT2-209ENST00000548159 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
CNOT2-209ENST00000548159 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
CNOT2-209ENST00000548159 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
CNOT2-209ENST00000548159 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
CNOT2-209ENST00000548159 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
CNOT2-209ENST00000548159 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
CNOT2-209ENST00000548159 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
CNOT2-209ENST00000548159 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
CNOT2-209ENST00000548159 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
CNOT2-209ENST00000548159 KRTAP12-4P60329 112 aa4.84□□□□□ -1.64
CNOT2-209ENST00000548159 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
CNOT2-209ENST00000548159 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
CNOT2-209ENST00000548159 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
CNOT2-209ENST00000548159 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
CNOT2-209ENST00000548159 MT1AP04731 61 aa4.65□□□□□ -1.67
CNOT2-209ENST00000548159 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CNOT2-209ENST00000548159 SPRR2EP22531 72 aa4.59□□□□□ -1.67
CNOT2-209ENST00000548159 SPRR2BP35325 72 aa4.59□□□□□ -1.67
CNOT2-209ENST00000548159 SPRR2AP35326 72 aa4.59□□□□□ -1.67
CNOT2-209ENST00000548159 NEBP20929 6669 aa4.58□□□□□ -1.68
CNOT2-209ENST00000548159 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
CNOT2-209ENST00000548159 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
CNOT2-209ENST00000548159 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
CNOT2-209ENST00000548159 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
CNOT2-209ENST00000548159 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
CNOT2-209ENST00000548159 SPRR2DP22532 72 aa4.38□□□□□ -1.71
CNOT2-209ENST00000548159 PRM1P04553 51 aa4.28□□□□□ -1.72
CNOT2-209ENST00000548159 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
CNOT2-209ENST00000548159 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
CNOT2-209ENST00000548159 MT3P25713 68 aa4.17□□□□□ -1.74
CNOT2-209ENST00000548159 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CNOT2-209ENST00000548159 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
CNOT2-209ENST00000548159 MT4P47944 62 aa3.93□□□□□ -1.78
CNOT2-209ENST00000548159 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
CNOT2-209ENST00000548159 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
CNOT2-209ENST00000548159 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
CNOT2-209ENST00000548159 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CNOT2-209ENST00000548159 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
CNOT2-209ENST00000548159 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
CNOT2-209ENST00000548159 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
CNOT2-209ENST00000548159 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
CNOT2-209ENST00000548159 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
CNOT2-209ENST00000548159 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
CNOT2-209ENST00000548159 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
CNOT2-209ENST00000548159 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
CNOT2-209ENST00000548159 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
CNOT2-209ENST00000548159 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
CNOT2-209ENST00000548159 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
CNOT2-209ENST00000548159 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
CNOT2-209ENST00000548159 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
CNOT2-209ENST00000548159 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CNOT2-209ENST00000548159 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
CNOT2-209ENST00000548159 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-209ENST00000548159 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CNOT2-209ENST00000548159 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
CNOT2-209ENST00000548159 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CNOT2-209ENST00000548159 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-209ENST00000548159 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
CNOT2-209ENST00000548159 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
CNOT2-209ENST00000548159 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
CNOT2-209ENST00000548159 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CNOT2-209ENST00000548159 LCE1FQ5T754 118 aa2.58□□□□□ -2
CNOT2-209ENST00000548159 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
CNOT2-209ENST00000548159 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 79.1 ms