RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
RAPGEF3-216ENST00000547856 MT1LQ93083 61 aa4.67□□□□□ -1.66
RAPGEF3-216ENST00000547856 MT1EP04732 61 aa4.62□□□□□ -1.67
RAPGEF3-216ENST00000547856 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
RAPGEF3-216ENST00000547856 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.68
RAPGEF3-216ENST00000547856 MT1GP13640 62 aa4.55□□□□□ -1.68
RAPGEF3-216ENST00000547856 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
RAPGEF3-216ENST00000547856 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
RAPGEF3-216ENST00000547856 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
RAPGEF3-216ENST00000547856 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
RAPGEF3-216ENST00000547856 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
RAPGEF3-216ENST00000547856 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
RAPGEF3-216ENST00000547856 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
RAPGEF3-216ENST00000547856 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
RAPGEF3-216ENST00000547856 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
RAPGEF3-216ENST00000547856 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
RAPGEF3-216ENST00000547856 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
RAPGEF3-216ENST00000547856 MT1MQ8N339 61 aa4.33□□□□□ -1.72
RAPGEF3-216ENST00000547856 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
RAPGEF3-216ENST00000547856 PRM1P04553 51 aa4.31□□□□□ -1.72
RAPGEF3-216ENST00000547856 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
RAPGEF3-216ENST00000547856 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
RAPGEF3-216ENST00000547856 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
RAPGEF3-216ENST00000547856 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
RAPGEF3-216ENST00000547856 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
RAPGEF3-216ENST00000547856 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
RAPGEF3-216ENST00000547856 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
RAPGEF3-216ENST00000547856 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
RAPGEF3-216ENST00000547856 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
RAPGEF3-216ENST00000547856 MT1AP04731 61 aa4.08□□□□□ -1.76
RAPGEF3-216ENST00000547856 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
RAPGEF3-216ENST00000547856 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
RAPGEF3-216ENST00000547856 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
RAPGEF3-216ENST00000547856 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
RAPGEF3-216ENST00000547856 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
RAPGEF3-216ENST00000547856 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
RAPGEF3-216ENST00000547856 SPRR2EP22531 72 aa3.89□□□□□ -1.79
RAPGEF3-216ENST00000547856 SPRR2BP35325 72 aa3.89□□□□□ -1.79
RAPGEF3-216ENST00000547856 SPRR2AP35326 72 aa3.89□□□□□ -1.79
RAPGEF3-216ENST00000547856 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
RAPGEF3-216ENST00000547856 SPRR2DP22532 72 aa3.72□□□□□ -1.81
RAPGEF3-216ENST00000547856 NEBP20929 6669 aa3.71□□□□□ -1.81
RAPGEF3-216ENST00000547856 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
RAPGEF3-216ENST00000547856 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
RAPGEF3-216ENST00000547856 MT3P25713 68 aa3.46□□□□□ -1.86
RAPGEF3-216ENST00000547856 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
RAPGEF3-216ENST00000547856 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
RAPGEF3-216ENST00000547856 MT4P47944 62 aa3.3□□□□□ -1.88
RAPGEF3-216ENST00000547856 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
RAPGEF3-216ENST00000547856 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
RAPGEF3-216ENST00000547856 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
RAPGEF3-216ENST00000547856 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
RAPGEF3-216ENST00000547856 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
RAPGEF3-216ENST00000547856 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
RAPGEF3-216ENST00000547856 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
RAPGEF3-216ENST00000547856 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
RAPGEF3-216ENST00000547856 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
RAPGEF3-216ENST00000547856 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
RAPGEF3-216ENST00000547856 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
RAPGEF3-216ENST00000547856 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
RAPGEF3-216ENST00000547856 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
RAPGEF3-216ENST00000547856 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
RAPGEF3-216ENST00000547856 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
RAPGEF3-216ENST00000547856 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
RAPGEF3-216ENST00000547856 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
RAPGEF3-216ENST00000547856 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
RAPGEF3-216ENST00000547856 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
RAPGEF3-216ENST00000547856 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
RAPGEF3-216ENST00000547856 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
RAPGEF3-216ENST00000547856 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
RAPGEF3-216ENST00000547856 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
RAPGEF3-216ENST00000547856 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
RAPGEF3-216ENST00000547856 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
RAPGEF3-216ENST00000547856 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
RAPGEF3-216ENST00000547856 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.04
RAPGEF3-216ENST00000547856 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
RAPGEF3-216ENST00000547856 PHGR1C9JFL3 82 aa2.03□□□□□ -2.09
RAPGEF3-216ENST00000547856 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 185.3 ms