RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
BRF1-212ENST00000547562 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
BRF1-212ENST00000547562 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
BRF1-212ENST00000547562 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
BRF1-212ENST00000547562 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
BRF1-212ENST00000547562 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
BRF1-212ENST00000547562 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
BRF1-212ENST00000547562 MT1GP13640 62 aa5.11□□□□□ -1.59
BRF1-212ENST00000547562 MT1MQ8N339 61 aa5.11□□□□□ -1.59
BRF1-212ENST00000547562 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
BRF1-212ENST00000547562 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
BRF1-212ENST00000547562 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
BRF1-212ENST00000547562 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
BRF1-212ENST00000547562 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
BRF1-212ENST00000547562 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.62
BRF1-212ENST00000547562 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
BRF1-212ENST00000547562 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
BRF1-212ENST00000547562 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
BRF1-212ENST00000547562 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
BRF1-212ENST00000547562 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
BRF1-212ENST00000547562 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
BRF1-212ENST00000547562 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
BRF1-212ENST00000547562 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
BRF1-212ENST00000547562 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
BRF1-212ENST00000547562 SPRR2EP22531 72 aa4.59□□□□□ -1.67
BRF1-212ENST00000547562 SPRR2BP35325 72 aa4.59□□□□□ -1.67
BRF1-212ENST00000547562 SPRR2AP35326 72 aa4.59□□□□□ -1.67
BRF1-212ENST00000547562 MT1AP04731 61 aa4.57□□□□□ -1.68
BRF1-212ENST00000547562 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
BRF1-212ENST00000547562 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
BRF1-212ENST00000547562 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
BRF1-212ENST00000547562 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
BRF1-212ENST00000547562 NEBP20929 6669 aa4.41□□□□□ -1.7
BRF1-212ENST00000547562 SPRR2DP22532 72 aa4.4□□□□□ -1.7
BRF1-212ENST00000547562 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
BRF1-212ENST00000547562 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
BRF1-212ENST00000547562 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
BRF1-212ENST00000547562 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
BRF1-212ENST00000547562 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
BRF1-212ENST00000547562 MT3P25713 68 aa4.12□□□□□ -1.75
BRF1-212ENST00000547562 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
BRF1-212ENST00000547562 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
BRF1-212ENST00000547562 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
BRF1-212ENST00000547562 PRM1P04553 51 aa3.99□□□□□ -1.77
BRF1-212ENST00000547562 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
BRF1-212ENST00000547562 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
BRF1-212ENST00000547562 MT4P47944 62 aa3.85□□□□□ -1.79
BRF1-212ENST00000547562 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
BRF1-212ENST00000547562 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
BRF1-212ENST00000547562 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
BRF1-212ENST00000547562 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
BRF1-212ENST00000547562 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
BRF1-212ENST00000547562 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
BRF1-212ENST00000547562 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
BRF1-212ENST00000547562 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.85
BRF1-212ENST00000547562 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
BRF1-212ENST00000547562 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
BRF1-212ENST00000547562 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
BRF1-212ENST00000547562 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
BRF1-212ENST00000547562 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
BRF1-212ENST00000547562 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
BRF1-212ENST00000547562 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
BRF1-212ENST00000547562 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
BRF1-212ENST00000547562 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
BRF1-212ENST00000547562 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
BRF1-212ENST00000547562 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
BRF1-212ENST00000547562 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
BRF1-212ENST00000547562 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
BRF1-212ENST00000547562 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
BRF1-212ENST00000547562 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
BRF1-212ENST00000547562 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
BRF1-212ENST00000547562 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
BRF1-212ENST00000547562 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
BRF1-212ENST00000547562 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
BRF1-212ENST00000547562 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
BRF1-212ENST00000547562 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
BRF1-212ENST00000547562 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
BRF1-212ENST00000547562 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 68.2 ms