RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
CACNB3-205ENST00000547392 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
CACNB3-205ENST00000547392 KRTAP2-1Q9BYU5 128 aa7.39□□□□□ -1.23
CACNB3-205ENST00000547392 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
CACNB3-205ENST00000547392 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
CACNB3-205ENST00000547392 MACF1Q9UPN3 7388 aaKnown RBP7.22□□□□□ -1.25
CACNB3-205ENST00000547392 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
CACNB3-205ENST00000547392 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
CACNB3-205ENST00000547392 MT1GP13640 62 aa7.05□□□□□ -1.28
CACNB3-205ENST00000547392 KRTAP19-3Q7Z4W3 81 aa7.05□□□□□ -1.28
CACNB3-205ENST00000547392 MT1MQ8N339 61 aa7.04□□□□□ -1.28
CACNB3-205ENST00000547392 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
CACNB3-205ENST00000547392 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
CACNB3-205ENST00000547392 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
CACNB3-205ENST00000547392 LCE5AQ5TCM9 118 aa6.82□□□□□ -1.32
CACNB3-205ENST00000547392 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
CACNB3-205ENST00000547392 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
CACNB3-205ENST00000547392 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
CACNB3-205ENST00000547392 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
CACNB3-205ENST00000547392 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
CACNB3-205ENST00000547392 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
CACNB3-205ENST00000547392 KRTAP12-4P60329 112 aa6.44□□□□□ -1.38
CACNB3-205ENST00000547392 SPRR2EP22531 72 aa6.42□□□□□ -1.38
CACNB3-205ENST00000547392 SPRR2BP35325 72 aa6.42□□□□□ -1.38
CACNB3-205ENST00000547392 SPRR2AP35326 72 aa6.42□□□□□ -1.38
CACNB3-205ENST00000547392 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
CACNB3-205ENST00000547392 MT1AP04731 61 aa6.36□□□□□ -1.39
CACNB3-205ENST00000547392 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
CACNB3-205ENST00000547392 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
CACNB3-205ENST00000547392 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
CACNB3-205ENST00000547392 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
CACNB3-205ENST00000547392 SPRR2DP22532 72 aa6.15□□□□□ -1.42
CACNB3-205ENST00000547392 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
CACNB3-205ENST00000547392 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
CACNB3-205ENST00000547392 NEBP20929 6669 aa6.08□□□□□ -1.44
CACNB3-205ENST00000547392 LCE3EQ5T5B0 92 aa6.02□□□□□ -1.45
CACNB3-205ENST00000547392 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
CACNB3-205ENST00000547392 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
CACNB3-205ENST00000547392 MT3P25713 68 aa5.7□□□□□ -1.5
CACNB3-205ENST00000547392 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
CACNB3-205ENST00000547392 PRM1P04553 51 aa5.67□□□□□ -1.5
CACNB3-205ENST00000547392 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
CACNB3-205ENST00000547392 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
CACNB3-205ENST00000547392 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
CACNB3-205ENST00000547392 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
CACNB3-205ENST00000547392 MT4P47944 62 aa5.47□□□□□ -1.53
CACNB3-205ENST00000547392 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
CACNB3-205ENST00000547392 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
CACNB3-205ENST00000547392 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
CACNB3-205ENST00000547392 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
CACNB3-205ENST00000547392 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
CACNB3-205ENST00000547392 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
CACNB3-205ENST00000547392 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
CACNB3-205ENST00000547392 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
CACNB3-205ENST00000547392 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
CACNB3-205ENST00000547392 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
CACNB3-205ENST00000547392 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
CACNB3-205ENST00000547392 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
CACNB3-205ENST00000547392 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
CACNB3-205ENST00000547392 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
CACNB3-205ENST00000547392 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
CACNB3-205ENST00000547392 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CACNB3-205ENST00000547392 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
CACNB3-205ENST00000547392 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
CACNB3-205ENST00000547392 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
CACNB3-205ENST00000547392 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
CACNB3-205ENST00000547392 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
CACNB3-205ENST00000547392 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
CACNB3-205ENST00000547392 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
CACNB3-205ENST00000547392 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
CACNB3-205ENST00000547392 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
CACNB3-205ENST00000547392 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CACNB3-205ENST00000547392 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
CACNB3-205ENST00000547392 KRTAP21-1Q3LI58 79 aa3.63□□□□□ -1.83
CACNB3-205ENST00000547392 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
CACNB3-205ENST00000547392 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
CACNB3-205ENST00000547392 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 1362.8 ms