RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
TMTC2-202ENST00000546590 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
TMTC2-202ENST00000546590 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
TMTC2-202ENST00000546590 MT1GP13640 62 aa2.95□□□□□ -1.94
TMTC2-202ENST00000546590 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
TMTC2-202ENST00000546590 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
TMTC2-202ENST00000546590 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
TMTC2-202ENST00000546590 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
TMTC2-202ENST00000546590 MT1LQ93083 61 aa2.85□□□□□ -1.95
TMTC2-202ENST00000546590 MT1EP04732 61 aa2.84□□□□□ -1.95
TMTC2-202ENST00000546590 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
TMTC2-202ENST00000546590 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
TMTC2-202ENST00000546590 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
TMTC2-202ENST00000546590 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.74□□□□□ -1.97
TMTC2-202ENST00000546590 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
TMTC2-202ENST00000546590 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
TMTC2-202ENST00000546590 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
TMTC2-202ENST00000546590 MT1MQ8N339 61 aa2.7□□□□□ -1.98
TMTC2-202ENST00000546590 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
TMTC2-202ENST00000546590 KRTAP19-6Q3LI70 58 aa2.69□□□□□ -1.98
TMTC2-202ENST00000546590 SPRR2EP22531 72 aa2.66□□□□□ -1.98
TMTC2-202ENST00000546590 SPRR2BP35325 72 aa2.66□□□□□ -1.98
TMTC2-202ENST00000546590 SPRR2AP35326 72 aa2.66□□□□□ -1.98
TMTC2-202ENST00000546590 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
TMTC2-202ENST00000546590 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
TMTC2-202ENST00000546590 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
TMTC2-202ENST00000546590 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
TMTC2-202ENST00000546590 SPRR2DP22532 72 aa2.52□□□□□ -2.01
TMTC2-202ENST00000546590 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
TMTC2-202ENST00000546590 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
TMTC2-202ENST00000546590 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
TMTC2-202ENST00000546590 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
TMTC2-202ENST00000546590 KRTAP19-4Q3LI73 84 aa2.47□□□□□ -2.01
TMTC2-202ENST00000546590 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
TMTC2-202ENST00000546590 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
TMTC2-202ENST00000546590 PRM1P04553 51 aa2.41□□□□□ -2.02
TMTC2-202ENST00000546590 MT4P47944 62 aa2.41□□□□□ -2.02
TMTC2-202ENST00000546590 MT1AP04731 61 aa2.36□□□□□ -2.03
TMTC2-202ENST00000546590 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
TMTC2-202ENST00000546590 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
TMTC2-202ENST00000546590 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
TMTC2-202ENST00000546590 NEBP20929 6669 aa2.29□□□□□ -2.04
TMTC2-202ENST00000546590 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
TMTC2-202ENST00000546590 MT3P25713 68 aa2.25□□□□□ -2.05
TMTC2-202ENST00000546590 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
TMTC2-202ENST00000546590 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
TMTC2-202ENST00000546590 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.05
TMTC2-202ENST00000546590 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
TMTC2-202ENST00000546590 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
TMTC2-202ENST00000546590 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
TMTC2-202ENST00000546590 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
TMTC2-202ENST00000546590 LCE4AQ5TA78 99 aa2.1□□□□□ -2.07
TMTC2-202ENST00000546590 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
TMTC2-202ENST00000546590 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
TMTC2-202ENST00000546590 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
TMTC2-202ENST00000546590 KRTAP4-11Q9BYQ6 195 aa1.9□□□□□ -2.11
TMTC2-202ENST00000546590 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
TMTC2-202ENST00000546590 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
TMTC2-202ENST00000546590 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
TMTC2-202ENST00000546590 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
TMTC2-202ENST00000546590 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
TMTC2-202ENST00000546590 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
TMTC2-202ENST00000546590 KRTAP4-2Q9BYR5 136 aa1.77□□□□□ -2.13
TMTC2-202ENST00000546590 KRTAP4-12Q9BQ66 201 aa1.74□□□□□ -2.13
TMTC2-202ENST00000546590 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
TMTC2-202ENST00000546590 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
TMTC2-202ENST00000546590 KRTAP9-9Q9BYP9 154 aa1.69□□□□□ -2.14
TMTC2-202ENST00000546590 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
TMTC2-202ENST00000546590 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
TMTC2-202ENST00000546590 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
TMTC2-202ENST00000546590 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
TMTC2-202ENST00000546590 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
TMTC2-202ENST00000546590 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
TMTC2-202ENST00000546590 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
TMTC2-202ENST00000546590 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
TMTC2-202ENST00000546590 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
TMTC2-202ENST00000546590 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
TMTC2-202ENST00000546590 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 153.2 ms