RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
CHERP-203ENST00000546361 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
CHERP-203ENST00000546361 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
CHERP-203ENST00000546361 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
CHERP-203ENST00000546361 MT1EP04732 61 aa3.95□□□□□ -1.78
CHERP-203ENST00000546361 MT1LQ93083 61 aa3.95□□□□□ -1.78
CHERP-203ENST00000546361 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
CHERP-203ENST00000546361 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
CHERP-203ENST00000546361 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
CHERP-203ENST00000546361 USH2AO75445 5202 aa3.89□□□□□ -1.79
CHERP-203ENST00000546361 MT1MQ8N339 61 aa3.82□□□□□ -1.8
CHERP-203ENST00000546361 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
CHERP-203ENST00000546361 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
CHERP-203ENST00000546361 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
CHERP-203ENST00000546361 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
CHERP-203ENST00000546361 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CHERP-203ENST00000546361 MT4P47944 62 aa3.71□□□□□ -1.82
CHERP-203ENST00000546361 KMT2DO14686 5537 aa3.7□□□□□ -1.82
CHERP-203ENST00000546361 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
CHERP-203ENST00000546361 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
CHERP-203ENST00000546361 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
CHERP-203ENST00000546361 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
CHERP-203ENST00000546361 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
CHERP-203ENST00000546361 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
CHERP-203ENST00000546361 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
CHERP-203ENST00000546361 MT3P25713 68 aa3.63□□□□□ -1.83
CHERP-203ENST00000546361 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
CHERP-203ENST00000546361 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
CHERP-203ENST00000546361 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
CHERP-203ENST00000546361 MT1AP04731 61 aa3.5□□□□□ -1.85
CHERP-203ENST00000546361 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CHERP-203ENST00000546361 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
CHERP-203ENST00000546361 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
CHERP-203ENST00000546361 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
CHERP-203ENST00000546361 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
CHERP-203ENST00000546361 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
CHERP-203ENST00000546361 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
CHERP-203ENST00000546361 NEBP20929 6669 aa3.38□□□□□ -1.87
CHERP-203ENST00000546361 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
CHERP-203ENST00000546361 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
CHERP-203ENST00000546361 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
CHERP-203ENST00000546361 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
CHERP-203ENST00000546361 PRM1P04553 51 aa3.28□□□□□ -1.88
CHERP-203ENST00000546361 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
CHERP-203ENST00000546361 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
CHERP-203ENST00000546361 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
CHERP-203ENST00000546361 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
CHERP-203ENST00000546361 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
CHERP-203ENST00000546361 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CHERP-203ENST00000546361 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
CHERP-203ENST00000546361 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
CHERP-203ENST00000546361 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CHERP-203ENST00000546361 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
CHERP-203ENST00000546361 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
CHERP-203ENST00000546361 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
CHERP-203ENST00000546361 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
CHERP-203ENST00000546361 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
CHERP-203ENST00000546361 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
CHERP-203ENST00000546361 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
CHERP-203ENST00000546361 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
CHERP-203ENST00000546361 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
CHERP-203ENST00000546361 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
CHERP-203ENST00000546361 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
CHERP-203ENST00000546361 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
CHERP-203ENST00000546361 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CHERP-203ENST00000546361 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
CHERP-203ENST00000546361 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
CHERP-203ENST00000546361 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CHERP-203ENST00000546361 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
CHERP-203ENST00000546361 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
CHERP-203ENST00000546361 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
CHERP-203ENST00000546361 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
CHERP-203ENST00000546361 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
CHERP-203ENST00000546361 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
CHERP-203ENST00000546361 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CHERP-203ENST00000546361 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
CHERP-203ENST00000546361 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 104.5 ms