RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
SOD2-216ENST00000546260 USH2AO75445 5202 aa3.31□□□□□ -1.88
SOD2-216ENST00000546260 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
SOD2-216ENST00000546260 PRM1P04553 51 aa3.29□□□□□ -1.88
SOD2-216ENST00000546260 LCE2BO14633 110 aa3.28□□□□□ -1.88
SOD2-216ENST00000546260 MT1LQ93083 61 aa3.28□□□□□ -1.88
SOD2-216ENST00000546260 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
SOD2-216ENST00000546260 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
SOD2-216ENST00000546260 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
SOD2-216ENST00000546260 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
SOD2-216ENST00000546260 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SOD2-216ENST00000546260 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
SOD2-216ENST00000546260 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
SOD2-216ENST00000546260 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
SOD2-216ENST00000546260 MT1EP04732 61 aa3.19□□□□□ -1.9
SOD2-216ENST00000546260 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
SOD2-216ENST00000546260 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
SOD2-216ENST00000546260 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
SOD2-216ENST00000546260 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
SOD2-216ENST00000546260 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
SOD2-216ENST00000546260 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
SOD2-216ENST00000546260 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
SOD2-216ENST00000546260 MT1MQ8N339 61 aa3□□□□□ -1.93
SOD2-216ENST00000546260 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
SOD2-216ENST00000546260 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
SOD2-216ENST00000546260 SPRR2EP22531 72 aa2.96□□□□□ -1.94
SOD2-216ENST00000546260 SPRR2BP35325 72 aa2.96□□□□□ -1.94
SOD2-216ENST00000546260 SPRR2AP35326 72 aa2.96□□□□□ -1.94
SOD2-216ENST00000546260 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
SOD2-216ENST00000546260 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
SOD2-216ENST00000546260 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
SOD2-216ENST00000546260 MT1AP04731 61 aa2.88□□□□□ -1.95
SOD2-216ENST00000546260 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
SOD2-216ENST00000546260 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
SOD2-216ENST00000546260 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
SOD2-216ENST00000546260 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
SOD2-216ENST00000546260 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
SOD2-216ENST00000546260 SPRR2DP22532 72 aa2.82□□□□□ -1.96
SOD2-216ENST00000546260 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
SOD2-216ENST00000546260 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
SOD2-216ENST00000546260 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SOD2-216ENST00000546260 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
SOD2-216ENST00000546260 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
SOD2-216ENST00000546260 MT4P47944 62 aa2.65□□□□□ -1.99
SOD2-216ENST00000546260 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
SOD2-216ENST00000546260 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
SOD2-216ENST00000546260 MT3P25713 68 aa2.62□□□□□ -1.99
SOD2-216ENST00000546260 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
SOD2-216ENST00000546260 MDN1Q9NU22 5596 aa2.59□□□□□ -2
SOD2-216ENST00000546260 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
SOD2-216ENST00000546260 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
SOD2-216ENST00000546260 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SOD2-216ENST00000546260 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
SOD2-216ENST00000546260 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
SOD2-216ENST00000546260 NEBP20929 6669 aa2.32□□□□□ -2.04
SOD2-216ENST00000546260 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
SOD2-216ENST00000546260 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
SOD2-216ENST00000546260 LCE4AQ5TA78 99 aa2.23□□□□□ -2.05
SOD2-216ENST00000546260 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
SOD2-216ENST00000546260 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
SOD2-216ENST00000546260 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SOD2-216ENST00000546260 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
SOD2-216ENST00000546260 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
SOD2-216ENST00000546260 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
SOD2-216ENST00000546260 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SOD2-216ENST00000546260 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
SOD2-216ENST00000546260 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
SOD2-216ENST00000546260 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SOD2-216ENST00000546260 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
SOD2-216ENST00000546260 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
SOD2-216ENST00000546260 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
SOD2-216ENST00000546260 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
SOD2-216ENST00000546260 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
SOD2-216ENST00000546260 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
SOD2-216ENST00000546260 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
SOD2-216ENST00000546260 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
SOD2-216ENST00000546260 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
SOD2-216ENST00000546260 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 112.7 ms