RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
SMAD7-202ENST00000545051 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
SMAD7-202ENST00000545051 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
SMAD7-202ENST00000545051 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
SMAD7-202ENST00000545051 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
SMAD7-202ENST00000545051 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
SMAD7-202ENST00000545051 KMT2DO14686 5537 aa5.01□□□□□ -1.61
SMAD7-202ENST00000545051 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
SMAD7-202ENST00000545051 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
SMAD7-202ENST00000545051 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
SMAD7-202ENST00000545051 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
SMAD7-202ENST00000545051 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
SMAD7-202ENST00000545051 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
SMAD7-202ENST00000545051 MT1LQ93083 61 aa4.95□□□□□ -1.62
SMAD7-202ENST00000545051 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
SMAD7-202ENST00000545051 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
SMAD7-202ENST00000545051 MT1EP04732 61 aa4.93□□□□□ -1.62
SMAD7-202ENST00000545051 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
SMAD7-202ENST00000545051 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
SMAD7-202ENST00000545051 SPRR2EP22531 72 aa4.76□□□□□ -1.65
SMAD7-202ENST00000545051 SPRR2BP35325 72 aa4.76□□□□□ -1.65
SMAD7-202ENST00000545051 SPRR2AP35326 72 aa4.76□□□□□ -1.65
SMAD7-202ENST00000545051 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
SMAD7-202ENST00000545051 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
SMAD7-202ENST00000545051 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
SMAD7-202ENST00000545051 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
SMAD7-202ENST00000545051 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
SMAD7-202ENST00000545051 NEBP20929 6669 aa4.69□□□□□ -1.66
SMAD7-202ENST00000545051 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
SMAD7-202ENST00000545051 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
SMAD7-202ENST00000545051 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
SMAD7-202ENST00000545051 MT1GP13640 62 aa4.61□□□□□ -1.67
SMAD7-202ENST00000545051 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SMAD7-202ENST00000545051 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
SMAD7-202ENST00000545051 MT1MQ8N339 61 aa4.6□□□□□ -1.67
SMAD7-202ENST00000545051 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
SMAD7-202ENST00000545051 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
SMAD7-202ENST00000545051 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
SMAD7-202ENST00000545051 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SMAD7-202ENST00000545051 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
SMAD7-202ENST00000545051 MT1AP04731 61 aa4.25□□□□□ -1.73
SMAD7-202ENST00000545051 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
SMAD7-202ENST00000545051 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
SMAD7-202ENST00000545051 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
SMAD7-202ENST00000545051 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
SMAD7-202ENST00000545051 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
SMAD7-202ENST00000545051 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SMAD7-202ENST00000545051 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
SMAD7-202ENST00000545051 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
SMAD7-202ENST00000545051 MT4P47944 62 aa3.98□□□□□ -1.77
SMAD7-202ENST00000545051 PRM1P04553 51 aa3.93□□□□□ -1.78
SMAD7-202ENST00000545051 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
SMAD7-202ENST00000545051 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
SMAD7-202ENST00000545051 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
SMAD7-202ENST00000545051 MT3P25713 68 aa3.74□□□□□ -1.81
SMAD7-202ENST00000545051 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
SMAD7-202ENST00000545051 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SMAD7-202ENST00000545051 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
SMAD7-202ENST00000545051 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
SMAD7-202ENST00000545051 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
SMAD7-202ENST00000545051 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
SMAD7-202ENST00000545051 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SMAD7-202ENST00000545051 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SMAD7-202ENST00000545051 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
SMAD7-202ENST00000545051 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.9
SMAD7-202ENST00000545051 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
SMAD7-202ENST00000545051 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
SMAD7-202ENST00000545051 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
SMAD7-202ENST00000545051 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SMAD7-202ENST00000545051 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
SMAD7-202ENST00000545051 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SMAD7-202ENST00000545051 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
SMAD7-202ENST00000545051 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SMAD7-202ENST00000545051 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SMAD7-202ENST00000545051 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SMAD7-202ENST00000545051 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
SMAD7-202ENST00000545051 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
SMAD7-202ENST00000545051 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms