RNA–Protein interactions for RNA: ENST00000544418.1

BCAT1-208, Transcript of branched chain amino acid transaminase 1, humanhuman

TSL 1 (best)

Gene BCAT1, Length 2,320 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1-208ENST00000544418 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
BCAT1-208ENST00000544418 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
BCAT1-208ENST00000544418 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
BCAT1-208ENST00000544418 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
BCAT1-208ENST00000544418 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
BCAT1-208ENST00000544418 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
BCAT1-208ENST00000544418 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
BCAT1-208ENST00000544418 KMT2DO14686 5537 aa5.33□□□□□ -1.56
BCAT1-208ENST00000544418 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
BCAT1-208ENST00000544418 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
BCAT1-208ENST00000544418 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
BCAT1-208ENST00000544418 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
BCAT1-208ENST00000544418 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
BCAT1-208ENST00000544418 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
BCAT1-208ENST00000544418 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
BCAT1-208ENST00000544418 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
BCAT1-208ENST00000544418 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
BCAT1-208ENST00000544418 MT1LQ93083 61 aa5.09□□□□□ -1.59
BCAT1-208ENST00000544418 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
BCAT1-208ENST00000544418 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
BCAT1-208ENST00000544418 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
BCAT1-208ENST00000544418 MT1EP04732 61 aa5.07□□□□□ -1.6
BCAT1-208ENST00000544418 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
BCAT1-208ENST00000544418 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
BCAT1-208ENST00000544418 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
BCAT1-208ENST00000544418 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
BCAT1-208ENST00000544418 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
BCAT1-208ENST00000544418 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
BCAT1-208ENST00000544418 SPRR2EP22531 72 aa4.88□□□□□ -1.63
BCAT1-208ENST00000544418 SPRR2BP35325 72 aa4.88□□□□□ -1.63
BCAT1-208ENST00000544418 SPRR2AP35326 72 aa4.88□□□□□ -1.63
BCAT1-208ENST00000544418 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
BCAT1-208ENST00000544418 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
BCAT1-208ENST00000544418 NEBP20929 6669 aa4.8□□□□□ -1.64
BCAT1-208ENST00000544418 MT1GP13640 62 aa4.79□□□□□ -1.64
BCAT1-208ENST00000544418 MT1MQ8N339 61 aa4.72□□□□□ -1.65
BCAT1-208ENST00000544418 SPRR2DP22532 72 aa4.7□□□□□ -1.66
BCAT1-208ENST00000544418 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
BCAT1-208ENST00000544418 KRTAP12-4P60329 112 aa4.65□□□□□ -1.66
BCAT1-208ENST00000544418 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
BCAT1-208ENST00000544418 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
BCAT1-208ENST00000544418 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
BCAT1-208ENST00000544418 MT1AP04731 61 aa4.37□□□□□ -1.71
BCAT1-208ENST00000544418 MT3P25713 68 aa4.37□□□□□ -1.71
BCAT1-208ENST00000544418 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
BCAT1-208ENST00000544418 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
BCAT1-208ENST00000544418 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
BCAT1-208ENST00000544418 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
BCAT1-208ENST00000544418 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
BCAT1-208ENST00000544418 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
BCAT1-208ENST00000544418 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
BCAT1-208ENST00000544418 PRM1P04553 51 aa4.13□□□□□ -1.75
BCAT1-208ENST00000544418 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
BCAT1-208ENST00000544418 MT4P47944 62 aa4.09□□□□□ -1.75
BCAT1-208ENST00000544418 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
BCAT1-208ENST00000544418 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
BCAT1-208ENST00000544418 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
BCAT1-208ENST00000544418 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
BCAT1-208ENST00000544418 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
BCAT1-208ENST00000544418 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
BCAT1-208ENST00000544418 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
BCAT1-208ENST00000544418 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
BCAT1-208ENST00000544418 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
BCAT1-208ENST00000544418 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
BCAT1-208ENST00000544418 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
BCAT1-208ENST00000544418 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
BCAT1-208ENST00000544418 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
BCAT1-208ENST00000544418 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
BCAT1-208ENST00000544418 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
BCAT1-208ENST00000544418 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
BCAT1-208ENST00000544418 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
BCAT1-208ENST00000544418 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
BCAT1-208ENST00000544418 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
BCAT1-208ENST00000544418 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
BCAT1-208ENST00000544418 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
BCAT1-208ENST00000544418 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
BCAT1-208ENST00000544418 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
BCAT1-208ENST00000544418 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms