RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
SCARB1-208ENST00000544327 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
SCARB1-208ENST00000544327 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
SCARB1-208ENST00000544327 MT1GP13640 62 aa5.85□□□□□ -1.47
SCARB1-208ENST00000544327 MT1MQ8N339 61 aa5.83□□□□□ -1.48
SCARB1-208ENST00000544327 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
SCARB1-208ENST00000544327 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
SCARB1-208ENST00000544327 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
SCARB1-208ENST00000544327 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
SCARB1-208ENST00000544327 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SCARB1-208ENST00000544327 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
SCARB1-208ENST00000544327 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
SCARB1-208ENST00000544327 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
SCARB1-208ENST00000544327 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
SCARB1-208ENST00000544327 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
SCARB1-208ENST00000544327 SYNE2Q8WXH0 6885 aaKnown RBP5.4□□□□□ -1.54
SCARB1-208ENST00000544327 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
SCARB1-208ENST00000544327 MT1AP04731 61 aa5.26□□□□□ -1.57
SCARB1-208ENST00000544327 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
SCARB1-208ENST00000544327 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
SCARB1-208ENST00000544327 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
SCARB1-208ENST00000544327 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
SCARB1-208ENST00000544327 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
SCARB1-208ENST00000544327 SPRR2EP22531 72 aa5.2□□□□□ -1.58
SCARB1-208ENST00000544327 SPRR2BP35325 72 aa5.2□□□□□ -1.58
SCARB1-208ENST00000544327 SPRR2AP35326 72 aa5.2□□□□□ -1.58
SCARB1-208ENST00000544327 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
SCARB1-208ENST00000544327 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
SCARB1-208ENST00000544327 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
SCARB1-208ENST00000544327 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.6
SCARB1-208ENST00000544327 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
SCARB1-208ENST00000544327 SPRR2DP22532 72 aa5□□□□□ -1.61
SCARB1-208ENST00000544327 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
SCARB1-208ENST00000544327 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
SCARB1-208ENST00000544327 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
SCARB1-208ENST00000544327 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SCARB1-208ENST00000544327 NEBP20929 6669 aa4.79□□□□□ -1.64
SCARB1-208ENST00000544327 MT3P25713 68 aa4.72□□□□□ -1.65
SCARB1-208ENST00000544327 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
SCARB1-208ENST00000544327 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
SCARB1-208ENST00000544327 PRM1P04553 51 aa4.53□□□□□ -1.68
SCARB1-208ENST00000544327 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SCARB1-208ENST00000544327 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
SCARB1-208ENST00000544327 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
SCARB1-208ENST00000544327 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
SCARB1-208ENST00000544327 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SCARB1-208ENST00000544327 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
SCARB1-208ENST00000544327 MT4P47944 62 aa4.32□□□□□ -1.72
SCARB1-208ENST00000544327 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
SCARB1-208ENST00000544327 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
SCARB1-208ENST00000544327 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
SCARB1-208ENST00000544327 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
SCARB1-208ENST00000544327 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SCARB1-208ENST00000544327 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SCARB1-208ENST00000544327 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
SCARB1-208ENST00000544327 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
SCARB1-208ENST00000544327 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
SCARB1-208ENST00000544327 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
SCARB1-208ENST00000544327 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SCARB1-208ENST00000544327 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SCARB1-208ENST00000544327 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
SCARB1-208ENST00000544327 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
SCARB1-208ENST00000544327 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SCARB1-208ENST00000544327 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
SCARB1-208ENST00000544327 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
SCARB1-208ENST00000544327 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
SCARB1-208ENST00000544327 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
SCARB1-208ENST00000544327 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
SCARB1-208ENST00000544327 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
SCARB1-208ENST00000544327 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
SCARB1-208ENST00000544327 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
SCARB1-208ENST00000544327 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SCARB1-208ENST00000544327 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SCARB1-208ENST00000544327 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
SCARB1-208ENST00000544327 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SCARB1-208ENST00000544327 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SCARB1-208ENST00000544327 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms