RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 H3BPC8 53 aa3.19□□□□□ -1.9
C2CD3-220ENST00000544293 LOC105371267A0A1B0GV96 52 aa3.18□□□□□ -1.9
C2CD3-220ENST00000544293 GTF2H5Q6ZYL4 71 aa3.18□□□□□ -1.9
C2CD3-220ENST00000544293 ACYP2P14621 99 aa3.17□□□□□ -1.9
C2CD3-220ENST00000544293 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
C2CD3-220ENST00000544293 LINC00643Q86TS7 51 aa3.16□□□□□ -1.9
C2CD3-220ENST00000544293 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
C2CD3-220ENST00000544293 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
C2CD3-220ENST00000544293 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
C2CD3-220ENST00000544293 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
C2CD3-220ENST00000544293 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
C2CD3-220ENST00000544293 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
C2CD3-220ENST00000544293 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
C2CD3-220ENST00000544293 SEC61GP60059 68 aa3.05□□□□□ -1.92
C2CD3-220ENST00000544293 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
C2CD3-220ENST00000544293 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
C2CD3-220ENST00000544293 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
C2CD3-220ENST00000544293 MUC5ACP98088 5654 aa3□□□□□ -1.93
C2CD3-220ENST00000544293 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
C2CD3-220ENST00000544293 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
C2CD3-220ENST00000544293 SCGB1A1P11684 91 aa2.99□□□□□ -1.93
C2CD3-220ENST00000544293 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
C2CD3-220ENST00000544293 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
C2CD3-220ENST00000544293 PCP4L1A6NKN8 68 aa2.93□□□□□ -1.94
C2CD3-220ENST00000544293 A8MU10 97 aa2.93□□□□□ -1.94
C2CD3-220ENST00000544293 TNP1P09430 55 aa2.93□□□□□ -1.94
C2CD3-220ENST00000544293 A0A1B0GU33 70 aa2.91□□□□□ -1.94
C2CD3-220ENST00000544293 SNURFQ9Y675 71 aa2.91□□□□□ -1.94
C2CD3-220ENST00000544293 SPANXA2-OT1Q8N9U9 137 aa2.89□□□□□ -1.95
C2CD3-220ENST00000544293 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
C2CD3-220ENST00000544293 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
C2CD3-220ENST00000544293 SERP1Q9Y6X1 66 aa2.86□□□□□ -1.95
C2CD3-220ENST00000544293 COA5Q86WW8 74 aa2.84□□□□□ -1.95
C2CD3-220ENST00000544293 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
C2CD3-220ENST00000544293 MT1AP04731 61 aa2.82□□□□□ -1.96
C2CD3-220ENST00000544293 SMIM20Q8N5G0 67 aa2.81□□□□□ -1.96
C2CD3-220ENST00000544293 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
C2CD3-220ENST00000544293 SMIM26A0A096LP01 95 aa2.78□□□□□ -1.96
C2CD3-220ENST00000544293 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
C2CD3-220ENST00000544293 A0A1B0GV90 55 aa2.76□□□□□ -1.97
C2CD3-220ENST00000544293 J3QR89 54 aa2.72□□□□□ -1.97
C2CD3-220ENST00000544293 K7ERU9 68 aa2.68□□□□□ -1.98
C2CD3-220ENST00000544293 A0A1B0GU69 56 aa2.66□□□□□ -1.98
C2CD3-220ENST00000544293 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
C2CD3-220ENST00000544293 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
C2CD3-220ENST00000544293 V9GYY9 64 aa2.64□□□□□ -1.99
C2CD3-220ENST00000544293 H7BZZ5 65 aa2.57□□□□□ -2
C2CD3-220ENST00000544293 ANAPC13Q9BS18 74 aa2.52□□□□□ -2.01
C2CD3-220ENST00000544293 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
C2CD3-220ENST00000544293 COX7CP15954 63 aa2.48□□□□□ -2.01
C2CD3-220ENST00000544293 RPS28P62857 69 aaKnown RBP2.46□□□□□ -2.02
C2CD3-220ENST00000544293 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
C2CD3-220ENST00000544293 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
C2CD3-220ENST00000544293 CCDC179H3BU77 68 aa2.38□□□□□ -2.03
C2CD3-220ENST00000544293 TMEM258P61165 79 aa2.38□□□□□ -2.03
C2CD3-220ENST00000544293 UQCR11O14957 56 aa2.37□□□□□ -2.03
C2CD3-220ENST00000544293 PSPHP1O15172 72 aa2.37□□□□□ -2.03
C2CD3-220ENST00000544293 PMAIP1Q13794 54 aa2.37□□□□□ -2.03
C2CD3-220ENST00000544293 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
C2CD3-220ENST00000544293 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
C2CD3-220ENST00000544293 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
C2CD3-220ENST00000544293 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
C2CD3-220ENST00000544293 ATP5EP56381 51 aaPredicted RBP2.29□□□□□ -2.04
C2CD3-220ENST00000544293 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
C2CD3-220ENST00000544293 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
C2CD3-220ENST00000544293 KTN1-AS1Q86SY8 53 aa2.26□□□□□ -2.05
C2CD3-220ENST00000544293 K7ERS5 55 aa2.22□□□□□ -2.05
C2CD3-220ENST00000544293 Q1T7F1 81 aa2.17□□□□□ -2.06
C2CD3-220ENST00000544293 A6NED7 52 aa2.15□□□□□ -2.07
C2CD3-220ENST00000544293 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
C2CD3-220ENST00000544293 ROMO1P60602 79 aa2.11□□□□□ -2.07
C2CD3-220ENST00000544293 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
C2CD3-220ENST00000544293 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
C2CD3-220ENST00000544293 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
C2CD3-220ENST00000544293 INE1O15225 51 aa1.61□□□□□ -2.15
C2CD3-220ENST00000544293 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
C2CD3-220ENST00000544293 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
C2CD3-220ENST00000544293 PRM1P04553 51 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 47.1 ms