RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 MUC12Q9UKN1 5478 aa6.94□□□□□ -1.3
ME3-212ENST00000543262 KRTAP19-3Q7Z4W3 81 aa6.92□□□□□ -1.3
ME3-212ENST00000543262 MT1GP13640 62 aa6.87□□□□□ -1.31
ME3-212ENST00000543262 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
ME3-212ENST00000543262 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
ME3-212ENST00000543262 MT1MQ8N339 61 aa6.85□□□□□ -1.31
ME3-212ENST00000543262 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.31
ME3-212ENST00000543262 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
ME3-212ENST00000543262 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
ME3-212ENST00000543262 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
ME3-212ENST00000543262 KRTAP2-3P0C7H8 128 aa6.7□□□□□ -1.34
ME3-212ENST00000543262 KRTAP2-4Q9BYR9 128 aa6.7□□□□□ -1.34
ME3-212ENST00000543262 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
ME3-212ENST00000543262 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
ME3-212ENST00000543262 KRTAP5-9P26371 169 aa6.56□□□□□ -1.36
ME3-212ENST00000543262 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
ME3-212ENST00000543262 LCE1AQ5T7P2 110 aa6.48□□□□□ -1.37
ME3-212ENST00000543262 MDN1Q9NU22 5596 aa6.47□□□□□ -1.37
ME3-212ENST00000543262 SPRR2EP22531 72 aa6.37□□□□□ -1.39
ME3-212ENST00000543262 SPRR2BP35325 72 aa6.37□□□□□ -1.39
ME3-212ENST00000543262 SPRR2AP35326 72 aa6.37□□□□□ -1.39
ME3-212ENST00000543262 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
ME3-212ENST00000543262 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.41
ME3-212ENST00000543262 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
ME3-212ENST00000543262 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
ME3-212ENST00000543262 SPRR2DP22532 72 aa6.11□□□□□ -1.43
ME3-212ENST00000543262 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
ME3-212ENST00000543262 MT1AP04731 61 aa6.1□□□□□ -1.43
ME3-212ENST00000543262 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
ME3-212ENST00000543262 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
ME3-212ENST00000543262 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
ME3-212ENST00000543262 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
ME3-212ENST00000543262 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
ME3-212ENST00000543262 NEBP20929 6669 aa5.74□□□□□ -1.49
ME3-212ENST00000543262 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
ME3-212ENST00000543262 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
ME3-212ENST00000543262 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
ME3-212ENST00000543262 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
ME3-212ENST00000543262 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
ME3-212ENST00000543262 MT3P25713 68 aa5.5□□□□□ -1.53
ME3-212ENST00000543262 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
ME3-212ENST00000543262 MT4P47944 62 aa5.36□□□□□ -1.55
ME3-212ENST00000543262 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
ME3-212ENST00000543262 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
ME3-212ENST00000543262 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
ME3-212ENST00000543262 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
ME3-212ENST00000543262 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
ME3-212ENST00000543262 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
ME3-212ENST00000543262 PRM1P04553 51 aa5.14□□□□□ -1.59
ME3-212ENST00000543262 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
ME3-212ENST00000543262 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
ME3-212ENST00000543262 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
ME3-212ENST00000543262 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
ME3-212ENST00000543262 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
ME3-212ENST00000543262 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
ME3-212ENST00000543262 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
ME3-212ENST00000543262 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
ME3-212ENST00000543262 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
ME3-212ENST00000543262 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
ME3-212ENST00000543262 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
ME3-212ENST00000543262 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
ME3-212ENST00000543262 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
ME3-212ENST00000543262 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
ME3-212ENST00000543262 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
ME3-212ENST00000543262 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.74
ME3-212ENST00000543262 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.76
ME3-212ENST00000543262 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
ME3-212ENST00000543262 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
ME3-212ENST00000543262 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
ME3-212ENST00000543262 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
ME3-212ENST00000543262 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
ME3-212ENST00000543262 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
ME3-212ENST00000543262 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
ME3-212ENST00000543262 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
ME3-212ENST00000543262 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
ME3-212ENST00000543262 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
ME3-212ENST00000543262 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 37.8 ms