RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 LINC01558Q9Y6Z2 57 aa1.02□□□□□ -2.25
LDHB-209ENST00000542765 KRTAP19-2Q3LHN2 52 aa1.01□□□□□ -2.25
LDHB-209ENST00000542765 COX6B2Q6YFQ2 88 aa1.01□□□□□ -2.25
LDHB-209ENST00000542765 MUC2Q02817 5179 aa1.01□□□□□ -2.25
LDHB-209ENST00000542765 ATP11AUNQ6ZP68 121 aa1□□□□□ -2.25
LDHB-209ENST00000542765 PRR15LQ9BU68 103 aa1□□□□□ -2.25
LDHB-209ENST00000542765 CHKB-CPT1BH3BT56 60 aa0.98□□□□□ -2.25
LDHB-209ENST00000542765 RNF213Q63HN8 5207 aa0.98□□□□□ -2.25
LDHB-209ENST00000542765 A0A1B0GU69 56 aa0.97□□□□□ -2.25
LDHB-209ENST00000542765 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
LDHB-209ENST00000542765 SPATA8Q6RVD6 105 aa0.97□□□□□ -2.25
LDHB-209ENST00000542765 BRK1Q8WUW1 75 aa0.97□□□□□ -2.25
LDHB-209ENST00000542765 S4R3F8 94 aa0.97□□□□□ -2.25
LDHB-209ENST00000542765 H0YAA0 97 aa0.96□□□□□ -2.26
LDHB-209ENST00000542765 UQCR11O14957 56 aa0.95□□□□□ -2.26
LDHB-209ENST00000542765 SPTSSBQ8NFR3 76 aa0.95□□□□□ -2.26
LDHB-209ENST00000542765 FAT4Q6V0I7 4981 aa0.94□□□□□ -2.26
LDHB-209ENST00000542765 A6NN06 94 aa0.94□□□□□ -2.26
LDHB-209ENST00000542765 MIR22HGQ0VDD5 57 aa0.94□□□□□ -2.26
LDHB-209ENST00000542765 CSAG1Q6PB30 78 aa0.93□□□□□ -2.26
LDHB-209ENST00000542765 MT1HP80294 61 aa0.91□□□□□ -2.26
LDHB-209ENST00000542765 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.26
LDHB-209ENST00000542765 M0QZ58 72 aa0.9□□□□□ -2.27
LDHB-209ENST00000542765 A0A0D9SG42 100 aa0.89□□□□□ -2.27
LDHB-209ENST00000542765 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
LDHB-209ENST00000542765 MT2AP02795 61 aa0.88□□□□□ -2.27
LDHB-209ENST00000542765 MT1FP04733 61 aa0.88□□□□□ -2.27
LDHB-209ENST00000542765 SPRR2GQ9BYE4 73 aa0.88□□□□□ -2.27
LDHB-209ENST00000542765 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
LDHB-209ENST00000542765 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
LDHB-209ENST00000542765 C10orf95Q9H7T3 257 aa0.86□□□□□ -2.27
LDHB-209ENST00000542765 M0R2T5 61 aa0.85□□□□□ -2.27
LDHB-209ENST00000542765 MT1BP07438 61 aa0.85□□□□□ -2.27
LDHB-209ENST00000542765 SYNE2Q8WXH0 6885 aaKnown RBP0.84□□□□□ -2.27
LDHB-209ENST00000542765 USH2AO75445 5202 aa0.84□□□□□ -2.28
LDHB-209ENST00000542765 NEBP20929 6669 aa0.83□□□□□ -2.28
LDHB-209ENST00000542765 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
LDHB-209ENST00000542765 MT1XP80297 61 aa0.82□□□□□ -2.28
LDHB-209ENST00000542765 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
LDHB-209ENST00000542765 PLAC4Q8WY50 150 aa0.81□□□□□ -2.28
LDHB-209ENST00000542765 KMT2DO14686 5537 aa0.8□□□□□ -2.28
LDHB-209ENST00000542765 MACF1Q9UPN3 7388 aaKnown RBP0.8□□□□□ -2.28
LDHB-209ENST00000542765 TNP1P09430 55 aa0.79□□□□□ -2.28
LDHB-209ENST00000542765 KRTAP19-6Q3LI70 58 aa0.77□□□□□ -2.29
LDHB-209ENST00000542765 KRTAP8-1Q8IUC2 63 aa0.77□□□□□ -2.29
LDHB-209ENST00000542765 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
LDHB-209ENST00000542765 KRTAP20-1Q3LI63 56 aa0.75□□□□□ -2.29
LDHB-209ENST00000542765 KRTAP19-7Q3SYF9 63 aa0.75□□□□□ -2.29
LDHB-209ENST00000542765 KRTAP19-5Q3LI72 72 aa0.74□□□□□ -2.29
LDHB-209ENST00000542765 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
LDHB-209ENST00000542765 MT1EP04732 61 aa0.72□□□□□ -2.29
LDHB-209ENST00000542765 MT1LQ93083 61 aa0.71□□□□□ -2.3
LDHB-209ENST00000542765 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
LDHB-209ENST00000542765 DSTQ03001 7570 aaKnown RBP0.7□□□□□ -2.3
LDHB-209ENST00000542765 MUC12Q9UKN1 5478 aa0.69□□□□□ -2.3
LDHB-209ENST00000542765 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
LDHB-209ENST00000542765 MT1MQ8N339 61 aa0.68□□□□□ -2.3
LDHB-209ENST00000542765 MT1GP13640 62 aa0.67□□□□□ -2.3
LDHB-209ENST00000542765 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
LDHB-209ENST00000542765 MDN1Q9NU22 5596 aa0.66□□□□□ -2.3
LDHB-209ENST00000542765 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
LDHB-209ENST00000542765 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.3
LDHB-209ENST00000542765 KRTAP2-3P0C7H8 128 aa0.64□□□□□ -2.31
LDHB-209ENST00000542765 KRTAP2-4Q9BYR9 128 aa0.64□□□□□ -2.31
LDHB-209ENST00000542765 KRTAP2-1Q9BYU5 128 aa0.64□□□□□ -2.31
LDHB-209ENST00000542765 SPRR2EP22531 72 aa0.61□□□□□ -2.31
LDHB-209ENST00000542765 SPRR2BP35325 72 aa0.61□□□□□ -2.31
LDHB-209ENST00000542765 SPRR2AP35326 72 aa0.61□□□□□ -2.31
LDHB-209ENST00000542765 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
LDHB-209ENST00000542765 MT1AP04731 61 aa0.59□□□□□ -2.31
LDHB-209ENST00000542765 SPRR2DP22532 72 aa0.59□□□□□ -2.31
LDHB-209ENST00000542765 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
LDHB-209ENST00000542765 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
LDHB-209ENST00000542765 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
LDHB-209ENST00000542765 MT4P47944 62 aa0.52□□□□□ -2.33
LDHB-209ENST00000542765 PRM1P04553 51 aa0.46□□□□□ -2.34
LDHB-209ENST00000542765 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
LDHB-209ENST00000542765 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms