RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SPTSSBQ8NFR3 76 aa0.92□□□□□ -2.26
CHD4-209ENST00000542717 PRO0461Q9UI25 63 aa0.92□□□□□ -2.26
CHD4-209ENST00000542717 HIST1H4AP62805 103 aaKnown RBP0.91□□□□□ -2.26
CHD4-209ENST00000542717 LCE1BQ5T7P3 118 aa0.91□□□□□ -2.26
CHD4-209ENST00000542717 LINC00643Q86TS7 51 aa0.91□□□□□ -2.26
CHD4-209ENST00000542717 SMIM20Q8N5G0 67 aa0.91□□□□□ -2.26
CHD4-209ENST00000542717 H3BPC8 53 aa0.9□□□□□ -2.27
CHD4-209ENST00000542717 K7ERU9 68 aa0.9□□□□□ -2.27
CHD4-209ENST00000542717 ACYP2P14621 99 aa0.9□□□□□ -2.27
CHD4-209ENST00000542717 OCR1Q9BZK8 76 aa0.9□□□□□ -2.27
CHD4-209ENST00000542717 SCGB1A1P11684 91 aa0.89□□□□□ -2.27
CHD4-209ENST00000542717 CHKB-CPT1BH3BT56 60 aa0.88□□□□□ -2.27
CHD4-209ENST00000542717 SPINT4Q6UDR6 99 aa0.88□□□□□ -2.27
CHD4-209ENST00000542717 A0A1B0GV90 55 aa0.87□□□□□ -2.27
CHD4-209ENST00000542717 TNP1P09430 55 aa0.87□□□□□ -2.27
CHD4-209ENST00000542717 MT3P25713 68 aa0.87□□□□□ -2.27
CHD4-209ENST00000542717 KRTAP12-3P60328 96 aa0.87□□□□□ -2.27
CHD4-209ENST00000542717 KRTAP12-1P59990 96 aa0.86□□□□□ -2.27
CHD4-209ENST00000542717 LCE1EQ5T753 118 aa0.85□□□□□ -2.27
CHD4-209ENST00000542717 KRTAP5-11Q6L8G4 156 aa0.85□□□□□ -2.27
CHD4-209ENST00000542717 SPATA8Q6RVD6 105 aa0.84□□□□□ -2.27
CHD4-209ENST00000542717 SERP2Q8N6R1 65 aa0.84□□□□□ -2.27
CHD4-209ENST00000542717 SPANXA2-OT1Q8N9U9 137 aa0.84□□□□□ -2.27
CHD4-209ENST00000542717 KRTAP19-4Q3LI73 84 aa0.83□□□□□ -2.28
CHD4-209ENST00000542717 SERP1Q9Y6X1 66 aa0.83□□□□□ -2.28
CHD4-209ENST00000542717 A0A1B0GU33 70 aa0.82□□□□□ -2.28
CHD4-209ENST00000542717 ATP5EP56381 51 aaPredicted RBP0.82□□□□□ -2.28
CHD4-209ENST00000542717 SEC61GP60059 68 aa0.82□□□□□ -2.28
CHD4-209ENST00000542717 LCE1CQ5T751 118 aa0.82□□□□□ -2.28
CHD4-209ENST00000542717 LCE1FQ5T754 118 aa0.82□□□□□ -2.28
CHD4-209ENST00000542717 KRTAP9-6A8MVA2 160 aa0.81□□□□□ -2.28
CHD4-209ENST00000542717 COX7CP15954 63 aa0.81□□□□□ -2.28
CHD4-209ENST00000542717 SMIM26A0A096LP01 95 aa0.8□□□□□ -2.28
CHD4-209ENST00000542717 ANAPC13Q9BS18 74 aa0.8□□□□□ -2.28
CHD4-209ENST00000542717 KRTAP25-1Q3LHN0 102 aa0.79□□□□□ -2.28
CHD4-209ENST00000542717 PRR15LQ9BU68 103 aa0.79□□□□□ -2.28
CHD4-209ENST00000542717 A8MU10 97 aa0.78□□□□□ -2.28
CHD4-209ENST00000542717 TMEM258P61165 79 aa0.78□□□□□ -2.28
CHD4-209ENST00000542717 LCE3CQ5T5A8 94 aa0.78□□□□□ -2.28
CHD4-209ENST00000542717 SNURFQ9Y675 71 aa0.78□□□□□ -2.28
CHD4-209ENST00000542717 V9GYY9 64 aa0.78□□□□□ -2.28
CHD4-209ENST00000542717 H7BZZ5 65 aa0.77□□□□□ -2.29
CHD4-209ENST00000542717 KRTAP15-1Q3LI76 137 aa0.77□□□□□ -2.29
CHD4-209ENST00000542717 COA5Q86WW8 74 aa0.77□□□□□ -2.29
CHD4-209ENST00000542717 A0A1B0GU69 56 aa0.76□□□□□ -2.29
CHD4-209ENST00000542717 K7ERS5 55 aa0.76□□□□□ -2.29
CHD4-209ENST00000542717 MUC19Q7Z5P9 8384 aa0.74□□□□□ -2.29
CHD4-209ENST00000542717 UQCR11O14957 56 aa0.74□□□□□ -2.29
CHD4-209ENST00000542717 RPS28P62857 69 aaKnown RBP0.74□□□□□ -2.29
CHD4-209ENST00000542717 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
CHD4-209ENST00000542717 CCDC179H3BU77 68 aa0.73□□□□□ -2.29
CHD4-209ENST00000542717 LINC01558Q9Y6Z2 57 aa0.73□□□□□ -2.29
CHD4-209ENST00000542717 KRTAP23-1A1A580 65 aa0.72□□□□□ -2.29
CHD4-209ENST00000542717 Q1T7F1 81 aa0.72□□□□□ -2.29
CHD4-209ENST00000542717 PCP4P48539 62 aa0.7□□□□□ -2.3
CHD4-209ENST00000542717 MIR22HGQ0VDD5 57 aa0.7□□□□□ -2.3
CHD4-209ENST00000542717 A6NED7 52 aa0.69□□□□□ -2.3
CHD4-209ENST00000542717 PSPHP1O15172 72 aa0.68□□□□□ -2.3
CHD4-209ENST00000542717 CDC42SE1Q9NRR8 79 aa0.68□□□□□ -2.3
CHD4-209ENST00000542717 KRTAP4-4Q9BYR3 166 aa0.66□□□□□ -2.3
CHD4-209ENST00000542717 ROMO1P60602 79 aa0.65□□□□□ -2.31
CHD4-209ENST00000542717 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.65□□□□□ -2.31
CHD4-209ENST00000542717 BRK1Q8WUW1 75 aa0.64□□□□□ -2.31
CHD4-209ENST00000542717 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
CHD4-209ENST00000542717 PMAIP1Q13794 54 aa0.61□□□□□ -2.31
CHD4-209ENST00000542717 PRO0628Q9UI54 55 aa0.6□□□□□ -2.31
CHD4-209ENST00000542717 KTN1-AS1Q86SY8 53 aa0.55□□□□□ -2.32
CHD4-209ENST00000542717 LUZP6Q538Z0 58 aa0.54□□□□□ -2.32
CHD4-209ENST00000542717 LCE3DQ9BYE3 92 aa0.54□□□□□ -2.32
CHD4-209ENST00000542717 SVIPQ8NHG7 77 aa0.52□□□□□ -2.33
CHD4-209ENST00000542717 PRAC1Q96KF2 57 aa0.5□□□□□ -2.33
CHD4-209ENST00000542717 LCE3EQ5T5B0 92 aa0.48□□□□□ -2.33
CHD4-209ENST00000542717 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
CHD4-209ENST00000542717 A0A0A0MQY5 61 aa0.41□□□□□ -2.34
CHD4-209ENST00000542717 NDUFAF8A1L188 74 aa0.39□□□□□ -2.35
CHD4-209ENST00000542717 INE1O15225 51 aa0.39□□□□□ -2.35
CHD4-209ENST00000542717 PRM1P04553 51 aa0.3□□□□□ -2.36
CHD4-209ENST00000542717 H3BS24 57 aa0.22□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms