RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
MDM2-228ENST00000542502 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
MDM2-228ENST00000542502 A6NN06 94 aa1.92□□□□□ -2.1
MDM2-228ENST00000542502 P0C880 135 aa1.92□□□□□ -2.1
MDM2-228ENST00000542502 A0A1B0GU33 70 aa1.91□□□□□ -2.1
MDM2-228ENST00000542502 K7ERS5 55 aa1.91□□□□□ -2.1
MDM2-228ENST00000542502 PRO2289Q9P1D8 64 aa1.91□□□□□ -2.1
MDM2-228ENST00000542502 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
MDM2-228ENST00000542502 RPS28P62857 69 aaKnown RBP1.9□□□□□ -2.11
MDM2-228ENST00000542502 USH2AO75445 5202 aa1.89□□□□□ -2.11
MDM2-228ENST00000542502 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
MDM2-228ENST00000542502 LINC01558Q9Y6Z2 57 aa1.89□□□□□ -2.11
MDM2-228ENST00000542502 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
MDM2-228ENST00000542502 UQCR11O14957 56 aa1.87□□□□□ -2.11
MDM2-228ENST00000542502 A6NED7 52 aa1.86□□□□□ -2.11
MDM2-228ENST00000542502 MT1BP07438 61 aa1.86□□□□□ -2.11
MDM2-228ENST00000542502 Q1T7F1 81 aa1.86□□□□□ -2.11
MDM2-228ENST00000542502 SSPOA2VEC9 5147 aa1.84□□□□□ -2.11
MDM2-228ENST00000542502 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
MDM2-228ENST00000542502 A0A0D9SG42 100 aa1.81□□□□□ -2.12
MDM2-228ENST00000542502 MIR22HGQ0VDD5 57 aa1.81□□□□□ -2.12
MDM2-228ENST00000542502 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
MDM2-228ENST00000542502 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
MDM2-228ENST00000542502 SPATA8Q6RVD6 105 aa1.81□□□□□ -2.12
MDM2-228ENST00000542502 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
MDM2-228ENST00000542502 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
MDM2-228ENST00000542502 MT1XP80297 61 aa1.78□□□□□ -2.12
MDM2-228ENST00000542502 PMAIP1Q13794 54 aa1.77□□□□□ -2.13
MDM2-228ENST00000542502 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
MDM2-228ENST00000542502 TNP1P09430 55 aa1.73□□□□□ -2.13
MDM2-228ENST00000542502 CDC42SE1Q9NRR8 79 aa1.73□□□□□ -2.13
MDM2-228ENST00000542502 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
MDM2-228ENST00000542502 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
MDM2-228ENST00000542502 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
MDM2-228ENST00000542502 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
MDM2-228ENST00000542502 C10orf95Q9H7T3 257 aa1.67□□□□□ -2.14
MDM2-228ENST00000542502 ROMO1P60602 79 aa1.66□□□□□ -2.14
MDM2-228ENST00000542502 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
MDM2-228ENST00000542502 BRK1Q8WUW1 75 aa1.64□□□□□ -2.15
MDM2-228ENST00000542502 KMT2DO14686 5537 aa1.64□□□□□ -2.15
MDM2-228ENST00000542502 SPRR2EP22531 72 aa1.61□□□□□ -2.15
MDM2-228ENST00000542502 SPRR2BP35325 72 aa1.61□□□□□ -2.15
MDM2-228ENST00000542502 SPRR2AP35326 72 aa1.61□□□□□ -2.15
MDM2-228ENST00000542502 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
MDM2-228ENST00000542502 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
MDM2-228ENST00000542502 MT1EP04732 61 aa1.58□□□□□ -2.16
MDM2-228ENST00000542502 MT1GP13640 62 aa1.58□□□□□ -2.16
MDM2-228ENST00000542502 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
MDM2-228ENST00000542502 NEBP20929 6669 aa1.58□□□□□ -2.16
MDM2-228ENST00000542502 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
MDM2-228ENST00000542502 KRTAP2-3P0C7H8 128 aa1.57□□□□□ -2.16
MDM2-228ENST00000542502 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
MDM2-228ENST00000542502 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
MDM2-228ENST00000542502 SPRR2DP22532 72 aa1.56□□□□□ -2.16
MDM2-228ENST00000542502 KTN1-AS1Q86SY8 53 aa1.56□□□□□ -2.16
MDM2-228ENST00000542502 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
MDM2-228ENST00000542502 MT1LQ93083 61 aa1.53□□□□□ -2.16
MDM2-228ENST00000542502 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
MDM2-228ENST00000542502 MT1MQ8N339 61 aa1.5□□□□□ -2.17
MDM2-228ENST00000542502 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
MDM2-228ENST00000542502 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
MDM2-228ENST00000542502 MT1AP04731 61 aa1.32□□□□□ -2.2
MDM2-228ENST00000542502 MT4P47944 62 aa1.32□□□□□ -2.2
MDM2-228ENST00000542502 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
MDM2-228ENST00000542502 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
MDM2-228ENST00000542502 SYNE1Q8NF91 8797 aaKnown RBP1.23□□□□□ -2.21
MDM2-228ENST00000542502 INE1O15225 51 aa1.22□□□□□ -2.21
MDM2-228ENST00000542502 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
MDM2-228ENST00000542502 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
MDM2-228ENST00000542502 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
MDM2-228ENST00000542502 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
MDM2-228ENST00000542502 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
MDM2-228ENST00000542502 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
MDM2-228ENST00000542502 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
MDM2-228ENST00000542502 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
MDM2-228ENST00000542502 PRM1P04553 51 aa0.81□□□□□ -2.28
MDM2-228ENST00000542502 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
MDM2-228ENST00000542502 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms