RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
SAMD1-203ENST00000541938 V9GYY9 64 aa6.8□□□□□ -1.32
SAMD1-203ENST00000541938 PSPHP1O15172 72 aa6.78□□□□□ -1.32
SAMD1-203ENST00000541938 Q1T7F1 81 aa6.76□□□□□ -1.33
SAMD1-203ENST00000541938 K7ERS5 55 aa6.72□□□□□ -1.33
SAMD1-203ENST00000541938 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
SAMD1-203ENST00000541938 GPR98Q8WXG9 6306 aa6.71□□□□□ -1.34
SAMD1-203ENST00000541938 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
SAMD1-203ENST00000541938 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
SAMD1-203ENST00000541938 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
SAMD1-203ENST00000541938 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
SAMD1-203ENST00000541938 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
SAMD1-203ENST00000541938 PCP4P48539 62 aa6.57□□□□□ -1.36
SAMD1-203ENST00000541938 A6NED7 52 aa6.54□□□□□ -1.36
SAMD1-203ENST00000541938 MT4P47944 62 aa6.53□□□□□ -1.36
SAMD1-203ENST00000541938 KRTAP5-4Q6L8H1 288 aa6.48□□□□□ -1.37
SAMD1-203ENST00000541938 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
SAMD1-203ENST00000541938 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
SAMD1-203ENST00000541938 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
SAMD1-203ENST00000541938 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
SAMD1-203ENST00000541938 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
SAMD1-203ENST00000541938 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
SAMD1-203ENST00000541938 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
SAMD1-203ENST00000541938 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
SAMD1-203ENST00000541938 ROMO1P60602 79 aa6.28□□□□□ -1.4
SAMD1-203ENST00000541938 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
SAMD1-203ENST00000541938 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
SAMD1-203ENST00000541938 KRTAP5-10Q6L8G5 202 aa6.24□□□□□ -1.41
SAMD1-203ENST00000541938 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
SAMD1-203ENST00000541938 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
SAMD1-203ENST00000541938 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
SAMD1-203ENST00000541938 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
SAMD1-203ENST00000541938 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
SAMD1-203ENST00000541938 KRTAP5-3Q6L8H2 238 aa6.05□□□□□ -1.44
SAMD1-203ENST00000541938 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
SAMD1-203ENST00000541938 MT1AP04731 61 aa5.88□□□□□ -1.47
SAMD1-203ENST00000541938 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
SAMD1-203ENST00000541938 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.47
SAMD1-203ENST00000541938 KRTAP5-2Q701N4 177 aa5.69□□□□□ -1.5
SAMD1-203ENST00000541938 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
SAMD1-203ENST00000541938 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
SAMD1-203ENST00000541938 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
SAMD1-203ENST00000541938 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
SAMD1-203ENST00000541938 KRTAP5-8O75690 187 aa5.41□□□□□ -1.54
SAMD1-203ENST00000541938 MT3P25713 68 aa5.37□□□□□ -1.55
SAMD1-203ENST00000541938 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
SAMD1-203ENST00000541938 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
SAMD1-203ENST00000541938 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
SAMD1-203ENST00000541938 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
SAMD1-203ENST00000541938 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
SAMD1-203ENST00000541938 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
SAMD1-203ENST00000541938 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
SAMD1-203ENST00000541938 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
SAMD1-203ENST00000541938 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
SAMD1-203ENST00000541938 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
SAMD1-203ENST00000541938 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
SAMD1-203ENST00000541938 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
SAMD1-203ENST00000541938 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
SAMD1-203ENST00000541938 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SAMD1-203ENST00000541938 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
SAMD1-203ENST00000541938 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
SAMD1-203ENST00000541938 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
SAMD1-203ENST00000541938 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
SAMD1-203ENST00000541938 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
SAMD1-203ENST00000541938 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
SAMD1-203ENST00000541938 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
SAMD1-203ENST00000541938 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
SAMD1-203ENST00000541938 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
SAMD1-203ENST00000541938 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
SAMD1-203ENST00000541938 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
SAMD1-203ENST00000541938 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
SAMD1-203ENST00000541938 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
SAMD1-203ENST00000541938 PRM1P04553 51 aa3.22□□□□□ -1.89
SAMD1-203ENST00000541938 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
SAMD1-203ENST00000541938 INE1O15225 51 aa3.08□□□□□ -1.92
SAMD1-203ENST00000541938 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
SAMD1-203ENST00000541938 H3BS24 57 aa2.48□□□□□ -2.01
SAMD1-203ENST00000541938 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms