RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 MT1LQ93083 61 aa4.63□□□□□ -1.67
PRKAB1-206ENST00000541640 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
PRKAB1-206ENST00000541640 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
PRKAB1-206ENST00000541640 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
PRKAB1-206ENST00000541640 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
PRKAB1-206ENST00000541640 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
PRKAB1-206ENST00000541640 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
PRKAB1-206ENST00000541640 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
PRKAB1-206ENST00000541640 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
PRKAB1-206ENST00000541640 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
PRKAB1-206ENST00000541640 MT1GP13640 62 aa4.35□□□□□ -1.71
PRKAB1-206ENST00000541640 MT1MQ8N339 61 aa4.34□□□□□ -1.71
PRKAB1-206ENST00000541640 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
PRKAB1-206ENST00000541640 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
PRKAB1-206ENST00000541640 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
PRKAB1-206ENST00000541640 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
PRKAB1-206ENST00000541640 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
PRKAB1-206ENST00000541640 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
PRKAB1-206ENST00000541640 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
PRKAB1-206ENST00000541640 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
PRKAB1-206ENST00000541640 SPRR2EP22531 72 aa4.17□□□□□ -1.74
PRKAB1-206ENST00000541640 SPRR2BP35325 72 aa4.17□□□□□ -1.74
PRKAB1-206ENST00000541640 SPRR2AP35326 72 aa4.17□□□□□ -1.74
PRKAB1-206ENST00000541640 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
PRKAB1-206ENST00000541640 NEBP20929 6669 aa4.08□□□□□ -1.76
PRKAB1-206ENST00000541640 SPRR2DP22532 72 aa4.01□□□□□ -1.77
PRKAB1-206ENST00000541640 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
PRKAB1-206ENST00000541640 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
PRKAB1-206ENST00000541640 MT1AP04731 61 aa3.91□□□□□ -1.78
PRKAB1-206ENST00000541640 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
PRKAB1-206ENST00000541640 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
PRKAB1-206ENST00000541640 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
PRKAB1-206ENST00000541640 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
PRKAB1-206ENST00000541640 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
PRKAB1-206ENST00000541640 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
PRKAB1-206ENST00000541640 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
PRKAB1-206ENST00000541640 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
PRKAB1-206ENST00000541640 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
PRKAB1-206ENST00000541640 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
PRKAB1-206ENST00000541640 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
PRKAB1-206ENST00000541640 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
PRKAB1-206ENST00000541640 MT3P25713 68 aa3.52□□□□□ -1.85
PRKAB1-206ENST00000541640 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
PRKAB1-206ENST00000541640 MT4P47944 62 aa3.5□□□□□ -1.85
PRKAB1-206ENST00000541640 PRM1P04553 51 aa3.47□□□□□ -1.85
PRKAB1-206ENST00000541640 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
PRKAB1-206ENST00000541640 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
PRKAB1-206ENST00000541640 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
PRKAB1-206ENST00000541640 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
PRKAB1-206ENST00000541640 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
PRKAB1-206ENST00000541640 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
PRKAB1-206ENST00000541640 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
PRKAB1-206ENST00000541640 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PRKAB1-206ENST00000541640 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
PRKAB1-206ENST00000541640 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
PRKAB1-206ENST00000541640 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
PRKAB1-206ENST00000541640 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
PRKAB1-206ENST00000541640 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
PRKAB1-206ENST00000541640 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
PRKAB1-206ENST00000541640 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
PRKAB1-206ENST00000541640 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
PRKAB1-206ENST00000541640 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
PRKAB1-206ENST00000541640 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
PRKAB1-206ENST00000541640 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
PRKAB1-206ENST00000541640 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
PRKAB1-206ENST00000541640 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
PRKAB1-206ENST00000541640 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
PRKAB1-206ENST00000541640 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
PRKAB1-206ENST00000541640 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
PRKAB1-206ENST00000541640 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
PRKAB1-206ENST00000541640 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
PRKAB1-206ENST00000541640 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
PRKAB1-206ENST00000541640 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
PRKAB1-206ENST00000541640 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
PRKAB1-206ENST00000541640 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
PRKAB1-206ENST00000541640 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
PRKAB1-206ENST00000541640 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms