RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 PRO2289Q9P1D8 64 aa2.09□□□□□ -2.07
SPARCL1-209ENST00000541496 FSIP2Q5CZC0 6907 aa2.09□□□□□ -2.08
SPARCL1-209ENST00000541496 USH2AO75445 5202 aa2.08□□□□□ -2.08
SPARCL1-209ENST00000541496 A8MU10 97 aa2.08□□□□□ -2.08
SPARCL1-209ENST00000541496 MIR22HGQ0VDD5 57 aa2.08□□□□□ -2.08
SPARCL1-209ENST00000541496 KRTAP12-2P59991 146 aa2.07□□□□□ -2.08
SPARCL1-209ENST00000541496 A6NED7 52 aa2.06□□□□□ -2.08
SPARCL1-209ENST00000541496 CDC42SE1Q9NRR8 79 aa2.06□□□□□ -2.08
SPARCL1-209ENST00000541496 SPINT4Q6UDR6 99 aa2.05□□□□□ -2.08
SPARCL1-209ENST00000541496 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
SPARCL1-209ENST00000541496 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
SPARCL1-209ENST00000541496 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
SPARCL1-209ENST00000541496 K7ERS5 55 aa2.02□□□□□ -2.09
SPARCL1-209ENST00000541496 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
SPARCL1-209ENST00000541496 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
SPARCL1-209ENST00000541496 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
SPARCL1-209ENST00000541496 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
SPARCL1-209ENST00000541496 TNP1P09430 55 aa1.95□□□□□ -2.1
SPARCL1-209ENST00000541496 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
SPARCL1-209ENST00000541496 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
SPARCL1-209ENST00000541496 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
SPARCL1-209ENST00000541496 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
SPARCL1-209ENST00000541496 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
SPARCL1-209ENST00000541496 ROMO1P60602 79 aa1.91□□□□□ -2.1
SPARCL1-209ENST00000541496 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
SPARCL1-209ENST00000541496 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
SPARCL1-209ENST00000541496 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SPARCL1-209ENST00000541496 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
SPARCL1-209ENST00000541496 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
SPARCL1-209ENST00000541496 MT1EP04732 61 aa1.84□□□□□ -2.11
SPARCL1-209ENST00000541496 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
SPARCL1-209ENST00000541496 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
SPARCL1-209ENST00000541496 KMT2DO14686 5537 aa1.81□□□□□ -2.12
SPARCL1-209ENST00000541496 SPRR2EP22531 72 aa1.8□□□□□ -2.12
SPARCL1-209ENST00000541496 SPRR2BP35325 72 aa1.8□□□□□ -2.12
SPARCL1-209ENST00000541496 SPRR2AP35326 72 aa1.8□□□□□ -2.12
SPARCL1-209ENST00000541496 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
SPARCL1-209ENST00000541496 MT1LQ93083 61 aa1.79□□□□□ -2.12
SPARCL1-209ENST00000541496 MT1GP13640 62 aa1.77□□□□□ -2.13
SPARCL1-209ENST00000541496 NEBP20929 6669 aa1.76□□□□□ -2.13
SPARCL1-209ENST00000541496 SPRR2DP22532 72 aa1.74□□□□□ -2.13
SPARCL1-209ENST00000541496 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
SPARCL1-209ENST00000541496 MT1MQ8N339 61 aa1.73□□□□□ -2.13
SPARCL1-209ENST00000541496 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
SPARCL1-209ENST00000541496 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
SPARCL1-209ENST00000541496 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
SPARCL1-209ENST00000541496 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
SPARCL1-209ENST00000541496 KRTAP20-1Q3LI63 56 aa1.7□□□□□ -2.14
SPARCL1-209ENST00000541496 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
SPARCL1-209ENST00000541496 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
SPARCL1-209ENST00000541496 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
SPARCL1-209ENST00000541496 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
SPARCL1-209ENST00000541496 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
SPARCL1-209ENST00000541496 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.16
SPARCL1-209ENST00000541496 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
SPARCL1-209ENST00000541496 KRTAP5-8O75690 187 aa1.54□□□□□ -2.16
SPARCL1-209ENST00000541496 MT1AP04731 61 aa1.53□□□□□ -2.16
SPARCL1-209ENST00000541496 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
SPARCL1-209ENST00000541496 MT4P47944 62 aa1.49□□□□□ -2.17
SPARCL1-209ENST00000541496 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
SPARCL1-209ENST00000541496 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
SPARCL1-209ENST00000541496 INE1O15225 51 aa1.45□□□□□ -2.18
SPARCL1-209ENST00000541496 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
SPARCL1-209ENST00000541496 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
SPARCL1-209ENST00000541496 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
SPARCL1-209ENST00000541496 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
SPARCL1-209ENST00000541496 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
SPARCL1-209ENST00000541496 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
SPARCL1-209ENST00000541496 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
SPARCL1-209ENST00000541496 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
SPARCL1-209ENST00000541496 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
SPARCL1-209ENST00000541496 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
SPARCL1-209ENST00000541496 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.25
SPARCL1-209ENST00000541496 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
SPARCL1-209ENST00000541496 PRM1P04553 51 aa0.97□□□□□ -2.25
SPARCL1-209ENST00000541496 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
SPARCL1-209ENST00000541496 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
SPARCL1-209ENST00000541496 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 61.1 ms