RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
PHACTR3-209ENST00000541461 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
PHACTR3-209ENST00000541461 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
PHACTR3-209ENST00000541461 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
PHACTR3-209ENST00000541461 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
PHACTR3-209ENST00000541461 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
PHACTR3-209ENST00000541461 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
PHACTR3-209ENST00000541461 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
PHACTR3-209ENST00000541461 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
PHACTR3-209ENST00000541461 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
PHACTR3-209ENST00000541461 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
PHACTR3-209ENST00000541461 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
PHACTR3-209ENST00000541461 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
PHACTR3-209ENST00000541461 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
PHACTR3-209ENST00000541461 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.82
PHACTR3-209ENST00000541461 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
PHACTR3-209ENST00000541461 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
PHACTR3-209ENST00000541461 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
PHACTR3-209ENST00000541461 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
PHACTR3-209ENST00000541461 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
PHACTR3-209ENST00000541461 MT1LQ93083 61 aa3.59□□□□□ -1.83
PHACTR3-209ENST00000541461 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
PHACTR3-209ENST00000541461 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
PHACTR3-209ENST00000541461 MT1EP04732 61 aa3.57□□□□□ -1.84
PHACTR3-209ENST00000541461 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
PHACTR3-209ENST00000541461 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
PHACTR3-209ENST00000541461 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
PHACTR3-209ENST00000541461 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PHACTR3-209ENST00000541461 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
PHACTR3-209ENST00000541461 SPRR2EP22531 72 aa3.42□□□□□ -1.86
PHACTR3-209ENST00000541461 SPRR2BP35325 72 aa3.42□□□□□ -1.86
PHACTR3-209ENST00000541461 SPRR2AP35326 72 aa3.42□□□□□ -1.86
PHACTR3-209ENST00000541461 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
PHACTR3-209ENST00000541461 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
PHACTR3-209ENST00000541461 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
PHACTR3-209ENST00000541461 MT1GP13640 62 aa3.4□□□□□ -1.87
PHACTR3-209ENST00000541461 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
PHACTR3-209ENST00000541461 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
PHACTR3-209ENST00000541461 NEBP20929 6669 aa3.38□□□□□ -1.87
PHACTR3-209ENST00000541461 MT1MQ8N339 61 aa3.33□□□□□ -1.88
PHACTR3-209ENST00000541461 SPRR2DP22532 72 aa3.3□□□□□ -1.88
PHACTR3-209ENST00000541461 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
PHACTR3-209ENST00000541461 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
PHACTR3-209ENST00000541461 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
PHACTR3-209ENST00000541461 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
PHACTR3-209ENST00000541461 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
PHACTR3-209ENST00000541461 MT1AP04731 61 aa3.05□□□□□ -1.92
PHACTR3-209ENST00000541461 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
PHACTR3-209ENST00000541461 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
PHACTR3-209ENST00000541461 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
PHACTR3-209ENST00000541461 MT3P25713 68 aa2.98□□□□□ -1.93
PHACTR3-209ENST00000541461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PHACTR3-209ENST00000541461 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
PHACTR3-209ENST00000541461 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
PHACTR3-209ENST00000541461 PRM1P04553 51 aa2.92□□□□□ -1.94
PHACTR3-209ENST00000541461 MT4P47944 62 aa2.9□□□□□ -1.95
PHACTR3-209ENST00000541461 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
PHACTR3-209ENST00000541461 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
PHACTR3-209ENST00000541461 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
PHACTR3-209ENST00000541461 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
PHACTR3-209ENST00000541461 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
PHACTR3-209ENST00000541461 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
PHACTR3-209ENST00000541461 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
PHACTR3-209ENST00000541461 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
PHACTR3-209ENST00000541461 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
PHACTR3-209ENST00000541461 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
PHACTR3-209ENST00000541461 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.04
PHACTR3-209ENST00000541461 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
PHACTR3-209ENST00000541461 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
PHACTR3-209ENST00000541461 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PHACTR3-209ENST00000541461 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
PHACTR3-209ENST00000541461 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
PHACTR3-209ENST00000541461 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
PHACTR3-209ENST00000541461 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
PHACTR3-209ENST00000541461 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
PHACTR3-209ENST00000541461 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
PHACTR3-209ENST00000541461 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 51.7 ms