RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
COPA-205ENST00000541366 LINC00643Q86TS7 51 aa3.91□□□□□ -1.78
COPA-205ENST00000541366 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
COPA-205ENST00000541366 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
COPA-205ENST00000541366 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
COPA-205ENST00000541366 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
COPA-205ENST00000541366 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
COPA-205ENST00000541366 LOC105371267A0A1B0GV96 52 aa3.85□□□□□ -1.79
COPA-205ENST00000541366 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
COPA-205ENST00000541366 SCGB1A1P11684 91 aa3.81□□□□□ -1.8
COPA-205ENST00000541366 KRTAP12-1P59990 96 aa3.81□□□□□ -1.8
COPA-205ENST00000541366 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
COPA-205ENST00000541366 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
COPA-205ENST00000541366 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
COPA-205ENST00000541366 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
COPA-205ENST00000541366 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
COPA-205ENST00000541366 TNP1P09430 55 aa3.7□□□□□ -1.82
COPA-205ENST00000541366 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
COPA-205ENST00000541366 SNURFQ9Y675 71 aa3.66□□□□□ -1.82
COPA-205ENST00000541366 A0A1B0GU33 70 aa3.65□□□□□ -1.83
COPA-205ENST00000541366 PCP4L1A6NKN8 68 aa3.64□□□□□ -1.83
COPA-205ENST00000541366 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
COPA-205ENST00000541366 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
COPA-205ENST00000541366 SEC61GP60059 68 aa3.62□□□□□ -1.83
COPA-205ENST00000541366 A8MU10 97 aa3.6□□□□□ -1.83
COPA-205ENST00000541366 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
COPA-205ENST00000541366 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
COPA-205ENST00000541366 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
COPA-205ENST00000541366 COA5Q86WW8 74 aa3.58□□□□□ -1.84
COPA-205ENST00000541366 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
COPA-205ENST00000541366 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
COPA-205ENST00000541366 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
COPA-205ENST00000541366 SMIM20Q8N5G0 67 aa3.53□□□□□ -1.84
COPA-205ENST00000541366 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
COPA-205ENST00000541366 MT1AP04731 61 aa3.5□□□□□ -1.85
COPA-205ENST00000541366 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
COPA-205ENST00000541366 J3QR89 54 aa3.43□□□□□ -1.86
COPA-205ENST00000541366 A0A1B0GV90 55 aa3.4□□□□□ -1.87
COPA-205ENST00000541366 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
COPA-205ENST00000541366 SERP2Q8N6R1 65 aa3.38□□□□□ -1.87
COPA-205ENST00000541366 A0A1B0GU69 56 aa3.37□□□□□ -1.87
COPA-205ENST00000541366 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
COPA-205ENST00000541366 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
COPA-205ENST00000541366 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
COPA-205ENST00000541366 H7BZZ5 65 aa3.17□□□□□ -1.9
COPA-205ENST00000541366 K7ERU9 68 aa3.11□□□□□ -1.91
COPA-205ENST00000541366 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
COPA-205ENST00000541366 COX7CP15954 63 aa3.08□□□□□ -1.92
COPA-205ENST00000541366 UQCR11O14957 56 aa3□□□□□ -1.93
COPA-205ENST00000541366 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
COPA-205ENST00000541366 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
COPA-205ENST00000541366 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
COPA-205ENST00000541366 K7ERS5 55 aa2.89□□□□□ -1.95
COPA-205ENST00000541366 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
COPA-205ENST00000541366 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
COPA-205ENST00000541366 CCDC179H3BU77 68 aa2.74□□□□□ -1.97
COPA-205ENST00000541366 ATP5EP56381 51 aaPredicted RBP2.73□□□□□ -1.97
COPA-205ENST00000541366 ANAPC13Q9BS18 74 aa2.71□□□□□ -1.98
COPA-205ENST00000541366 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
COPA-205ENST00000541366 Q1T7F1 81 aa2.68□□□□□ -1.98
COPA-205ENST00000541366 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
COPA-205ENST00000541366 ROMO1P60602 79 aa2.66□□□□□ -1.98
COPA-205ENST00000541366 PSPHP1O15172 72 aa2.65□□□□□ -1.99
COPA-205ENST00000541366 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
COPA-205ENST00000541366 TMEM258P61165 79 aa2.51□□□□□ -2.01
COPA-205ENST00000541366 A6NED7 52 aa2.49□□□□□ -2.01
COPA-205ENST00000541366 V9GYY9 64 aa2.44□□□□□ -2.02
COPA-205ENST00000541366 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
COPA-205ENST00000541366 PRO0628Q9UI54 55 aa2.28□□□□□ -2.04
COPA-205ENST00000541366 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
COPA-205ENST00000541366 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
COPA-205ENST00000541366 KTN1-AS1Q86SY8 53 aa2.06□□□□□ -2.08
COPA-205ENST00000541366 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
COPA-205ENST00000541366 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
COPA-205ENST00000541366 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
COPA-205ENST00000541366 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
COPA-205ENST00000541366 INE1O15225 51 aa1.48□□□□□ -2.17
COPA-205ENST00000541366 PRM1P04553 51 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 8.4 ms