RNA–Protein interactions for RNA: ENST00000541091.5

GRIA3-204, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene GRIA3, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-204ENST00000541091 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
GRIA3-204ENST00000541091 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
GRIA3-204ENST00000541091 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
GRIA3-204ENST00000541091 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
GRIA3-204ENST00000541091 USH2AO75445 5202 aa2.88□□□□□ -1.95
GRIA3-204ENST00000541091 KRTAP10-7P60409 375 aaPredicted RBP2.86□□□□□ -1.95
GRIA3-204ENST00000541091 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
GRIA3-204ENST00000541091 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
GRIA3-204ENST00000541091 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
GRIA3-204ENST00000541091 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
GRIA3-204ENST00000541091 KMT2DO14686 5537 aa2.78□□□□□ -1.96
GRIA3-204ENST00000541091 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
GRIA3-204ENST00000541091 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
GRIA3-204ENST00000541091 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
GRIA3-204ENST00000541091 MT3P25713 68 aa2.73□□□□□ -1.97
GRIA3-204ENST00000541091 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
GRIA3-204ENST00000541091 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
GRIA3-204ENST00000541091 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
GRIA3-204ENST00000541091 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
GRIA3-204ENST00000541091 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
GRIA3-204ENST00000541091 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
GRIA3-204ENST00000541091 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
GRIA3-204ENST00000541091 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
GRIA3-204ENST00000541091 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
GRIA3-204ENST00000541091 MT1EP04732 61 aa2.53□□□□□ -2
GRIA3-204ENST00000541091 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
GRIA3-204ENST00000541091 MT1LQ93083 61 aa2.52□□□□□ -2.01
GRIA3-204ENST00000541091 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
GRIA3-204ENST00000541091 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
GRIA3-204ENST00000541091 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
GRIA3-204ENST00000541091 SPRR2FQ96RM1 72 aa2.42□□□□□ -2.02
GRIA3-204ENST00000541091 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
GRIA3-204ENST00000541091 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
GRIA3-204ENST00000541091 MT1GP13640 62 aa2.38□□□□□ -2.03
GRIA3-204ENST00000541091 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
GRIA3-204ENST00000541091 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
GRIA3-204ENST00000541091 MT1MQ8N339 61 aa2.38□□□□□ -2.03
GRIA3-204ENST00000541091 NEBP20929 6669 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 SPRR2EP22531 72 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 SPRR2BP35325 72 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 SPRR2AP35326 72 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
GRIA3-204ENST00000541091 KRTAP20-1Q3LI63 56 aa2.35□□□□□ -2.03
GRIA3-204ENST00000541091 SPRR2DP22532 72 aa2.29□□□□□ -2.04
GRIA3-204ENST00000541091 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
GRIA3-204ENST00000541091 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
GRIA3-204ENST00000541091 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
GRIA3-204ENST00000541091 MT1AP04731 61 aa2.11□□□□□ -2.07
GRIA3-204ENST00000541091 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
GRIA3-204ENST00000541091 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
GRIA3-204ENST00000541091 PRM1P04553 51 aa2□□□□□ -2.09
GRIA3-204ENST00000541091 MT4P47944 62 aa1.99□□□□□ -2.09
GRIA3-204ENST00000541091 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
GRIA3-204ENST00000541091 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
GRIA3-204ENST00000541091 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
GRIA3-204ENST00000541091 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
GRIA3-204ENST00000541091 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
GRIA3-204ENST00000541091 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
GRIA3-204ENST00000541091 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
GRIA3-204ENST00000541091 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
GRIA3-204ENST00000541091 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
GRIA3-204ENST00000541091 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
GRIA3-204ENST00000541091 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
GRIA3-204ENST00000541091 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
GRIA3-204ENST00000541091 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
GRIA3-204ENST00000541091 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
GRIA3-204ENST00000541091 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
GRIA3-204ENST00000541091 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
GRIA3-204ENST00000541091 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
GRIA3-204ENST00000541091 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
GRIA3-204ENST00000541091 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
GRIA3-204ENST00000541091 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
GRIA3-204ENST00000541091 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
GRIA3-204ENST00000541091 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
GRIA3-204ENST00000541091 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 102.8 ms