RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
CACNB3-203ENST00000540990 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
CACNB3-203ENST00000540990 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
CACNB3-203ENST00000540990 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
CACNB3-203ENST00000540990 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
CACNB3-203ENST00000540990 MT1GP13640 62 aa5.47□□□□□ -1.53
CACNB3-203ENST00000540990 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
CACNB3-203ENST00000540990 MT1MQ8N339 61 aa5.46□□□□□ -1.53
CACNB3-203ENST00000540990 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
CACNB3-203ENST00000540990 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CACNB3-203ENST00000540990 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
CACNB3-203ENST00000540990 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CACNB3-203ENST00000540990 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
CACNB3-203ENST00000540990 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
CACNB3-203ENST00000540990 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
CACNB3-203ENST00000540990 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
CACNB3-203ENST00000540990 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
CACNB3-203ENST00000540990 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
CACNB3-203ENST00000540990 KRTAP5-9P26371 169 aa5.09□□□□□ -1.59
CACNB3-203ENST00000540990 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
CACNB3-203ENST00000540990 MT1AP04731 61 aa4.97□□□□□ -1.61
CACNB3-203ENST00000540990 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
CACNB3-203ENST00000540990 SPRR2EP22531 72 aa4.92□□□□□ -1.62
CACNB3-203ENST00000540990 SPRR2BP35325 72 aa4.92□□□□□ -1.62
CACNB3-203ENST00000540990 SPRR2AP35326 72 aa4.92□□□□□ -1.62
CACNB3-203ENST00000540990 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
CACNB3-203ENST00000540990 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.62
CACNB3-203ENST00000540990 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
CACNB3-203ENST00000540990 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
CACNB3-203ENST00000540990 NEBP20929 6669 aa4.84□□□□□ -1.63
CACNB3-203ENST00000540990 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
CACNB3-203ENST00000540990 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
CACNB3-203ENST00000540990 SPRR2DP22532 72 aa4.75□□□□□ -1.65
CACNB3-203ENST00000540990 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
CACNB3-203ENST00000540990 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
CACNB3-203ENST00000540990 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
CACNB3-203ENST00000540990 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
CACNB3-203ENST00000540990 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
CACNB3-203ENST00000540990 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CACNB3-203ENST00000540990 PRM1P04553 51 aa4.43□□□□□ -1.7
CACNB3-203ENST00000540990 MT3P25713 68 aa4.42□□□□□ -1.7
CACNB3-203ENST00000540990 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
CACNB3-203ENST00000540990 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
CACNB3-203ENST00000540990 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
CACNB3-203ENST00000540990 MT4P47944 62 aa4.13□□□□□ -1.75
CACNB3-203ENST00000540990 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CACNB3-203ENST00000540990 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CACNB3-203ENST00000540990 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
CACNB3-203ENST00000540990 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
CACNB3-203ENST00000540990 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CACNB3-203ENST00000540990 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CACNB3-203ENST00000540990 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
CACNB3-203ENST00000540990 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.8
CACNB3-203ENST00000540990 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CACNB3-203ENST00000540990 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
CACNB3-203ENST00000540990 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
CACNB3-203ENST00000540990 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
CACNB3-203ENST00000540990 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
CACNB3-203ENST00000540990 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
CACNB3-203ENST00000540990 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
CACNB3-203ENST00000540990 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
CACNB3-203ENST00000540990 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CACNB3-203ENST00000540990 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
CACNB3-203ENST00000540990 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
CACNB3-203ENST00000540990 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
CACNB3-203ENST00000540990 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CACNB3-203ENST00000540990 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
CACNB3-203ENST00000540990 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
CACNB3-203ENST00000540990 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
CACNB3-203ENST00000540990 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CACNB3-203ENST00000540990 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CACNB3-203ENST00000540990 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
CACNB3-203ENST00000540990 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
CACNB3-203ENST00000540990 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CACNB3-203ENST00000540990 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CACNB3-203ENST00000540990 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CACNB3-203ENST00000540990 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 165.7 ms