RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 MT1LQ93083 61 aa3.96□□□□□ -1.78
LGR5-203ENST00000540815 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.79
LGR5-203ENST00000540815 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
LGR5-203ENST00000540815 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
LGR5-203ENST00000540815 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
LGR5-203ENST00000540815 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
LGR5-203ENST00000540815 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
LGR5-203ENST00000540815 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
LGR5-203ENST00000540815 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
LGR5-203ENST00000540815 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
LGR5-203ENST00000540815 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
LGR5-203ENST00000540815 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
LGR5-203ENST00000540815 MT1GP13640 62 aa3.74□□□□□ -1.81
LGR5-203ENST00000540815 MT1MQ8N339 61 aa3.73□□□□□ -1.81
LGR5-203ENST00000540815 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
LGR5-203ENST00000540815 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
LGR5-203ENST00000540815 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
LGR5-203ENST00000540815 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
LGR5-203ENST00000540815 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
LGR5-203ENST00000540815 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
LGR5-203ENST00000540815 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
LGR5-203ENST00000540815 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
LGR5-203ENST00000540815 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
LGR5-203ENST00000540815 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
LGR5-203ENST00000540815 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
LGR5-203ENST00000540815 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
LGR5-203ENST00000540815 NEBP20929 6669 aa3.41□□□□□ -1.86
LGR5-203ENST00000540815 LCE3BQ5TA77 95 aa3.4□□□□□ -1.87
LGR5-203ENST00000540815 SPRR2EP22531 72 aa3.39□□□□□ -1.87
LGR5-203ENST00000540815 SPRR2BP35325 72 aa3.39□□□□□ -1.87
LGR5-203ENST00000540815 SPRR2AP35326 72 aa3.39□□□□□ -1.87
LGR5-203ENST00000540815 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
LGR5-203ENST00000540815 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
LGR5-203ENST00000540815 MT1AP04731 61 aa3.34□□□□□ -1.87
LGR5-203ENST00000540815 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
LGR5-203ENST00000540815 PRM1P04553 51 aa3.28□□□□□ -1.88
LGR5-203ENST00000540815 SPRR2DP22532 72 aa3.27□□□□□ -1.89
LGR5-203ENST00000540815 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
LGR5-203ENST00000540815 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
LGR5-203ENST00000540815 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
LGR5-203ENST00000540815 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
LGR5-203ENST00000540815 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
LGR5-203ENST00000540815 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
LGR5-203ENST00000540815 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
LGR5-203ENST00000540815 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
LGR5-203ENST00000540815 MT3P25713 68 aa3.01□□□□□ -1.93
LGR5-203ENST00000540815 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
LGR5-203ENST00000540815 MT4P47944 62 aa2.86□□□□□ -1.95
LGR5-203ENST00000540815 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
LGR5-203ENST00000540815 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
LGR5-203ENST00000540815 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
LGR5-203ENST00000540815 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
LGR5-203ENST00000540815 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
LGR5-203ENST00000540815 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
LGR5-203ENST00000540815 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
LGR5-203ENST00000540815 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
LGR5-203ENST00000540815 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
LGR5-203ENST00000540815 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -2
LGR5-203ENST00000540815 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
LGR5-203ENST00000540815 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
LGR5-203ENST00000540815 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
LGR5-203ENST00000540815 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
LGR5-203ENST00000540815 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
LGR5-203ENST00000540815 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
LGR5-203ENST00000540815 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
LGR5-203ENST00000540815 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
LGR5-203ENST00000540815 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
LGR5-203ENST00000540815 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
LGR5-203ENST00000540815 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
LGR5-203ENST00000540815 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
LGR5-203ENST00000540815 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
LGR5-203ENST00000540815 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
LGR5-203ENST00000540815 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
LGR5-203ENST00000540815 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
LGR5-203ENST00000540815 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
LGR5-203ENST00000540815 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
LGR5-203ENST00000540815 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms