RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
KPNB1-203ENST00000540627 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
KPNB1-203ENST00000540627 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
KPNB1-203ENST00000540627 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
KPNB1-203ENST00000540627 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
KPNB1-203ENST00000540627 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
KPNB1-203ENST00000540627 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
KPNB1-203ENST00000540627 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
KPNB1-203ENST00000540627 USH2AO75445 5202 aa2.61□□□□□ -1.99
KPNB1-203ENST00000540627 KRTAP4-8A0A0G2JLE6 195 aa2.61□□□□□ -1.99
KPNB1-203ENST00000540627 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
KPNB1-203ENST00000540627 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
KPNB1-203ENST00000540627 KMT2DO14686 5537 aa2.59□□□□□ -2
KPNB1-203ENST00000540627 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
KPNB1-203ENST00000540627 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
KPNB1-203ENST00000540627 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
KPNB1-203ENST00000540627 NEBP20929 6669 aa2.55□□□□□ -2
KPNB1-203ENST00000540627 KRTAP4-7Q9BYR0 210 aa2.51□□□□□ -2.01
KPNB1-203ENST00000540627 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
KPNB1-203ENST00000540627 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
KPNB1-203ENST00000540627 MT1LQ93083 61 aa2.49□□□□□ -2.01
KPNB1-203ENST00000540627 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
KPNB1-203ENST00000540627 MT1EP04732 61 aa2.49□□□□□ -2.01
KPNB1-203ENST00000540627 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
KPNB1-203ENST00000540627 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
KPNB1-203ENST00000540627 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
KPNB1-203ENST00000540627 KRTAP4-9Q9BYQ8 210 aa2.43□□□□□ -2.02
KPNB1-203ENST00000540627 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
KPNB1-203ENST00000540627 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
KPNB1-203ENST00000540627 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
KPNB1-203ENST00000540627 MT1GP13640 62 aa2.33□□□□□ -2.04
KPNB1-203ENST00000540627 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
KPNB1-203ENST00000540627 MT1MQ8N339 61 aa2.32□□□□□ -2.04
KPNB1-203ENST00000540627 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
KPNB1-203ENST00000540627 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
KPNB1-203ENST00000540627 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
KPNB1-203ENST00000540627 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
KPNB1-203ENST00000540627 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
KPNB1-203ENST00000540627 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
KPNB1-203ENST00000540627 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
KPNB1-203ENST00000540627 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
KPNB1-203ENST00000540627 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
KPNB1-203ENST00000540627 SPRR2EP22531 72 aa2.13□□□□□ -2.07
KPNB1-203ENST00000540627 SPRR2BP35325 72 aa2.13□□□□□ -2.07
KPNB1-203ENST00000540627 SPRR2AP35326 72 aa2.13□□□□□ -2.07
KPNB1-203ENST00000540627 MT1AP04731 61 aa2.12□□□□□ -2.07
KPNB1-203ENST00000540627 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
KPNB1-203ENST00000540627 SPRR2DP22532 72 aa2.09□□□□□ -2.07
KPNB1-203ENST00000540627 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
KPNB1-203ENST00000540627 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
KPNB1-203ENST00000540627 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
KPNB1-203ENST00000540627 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
KPNB1-203ENST00000540627 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
KPNB1-203ENST00000540627 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
KPNB1-203ENST00000540627 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
KPNB1-203ENST00000540627 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
KPNB1-203ENST00000540627 PRM1P04553 51 aa1.96□□□□□ -2.1
KPNB1-203ENST00000540627 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
KPNB1-203ENST00000540627 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
KPNB1-203ENST00000540627 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
KPNB1-203ENST00000540627 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
KPNB1-203ENST00000540627 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
KPNB1-203ENST00000540627 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
KPNB1-203ENST00000540627 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
KPNB1-203ENST00000540627 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
KPNB1-203ENST00000540627 MT4P47944 62 aa1.7□□□□□ -2.14
KPNB1-203ENST00000540627 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
KPNB1-203ENST00000540627 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
KPNB1-203ENST00000540627 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
KPNB1-203ENST00000540627 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
KPNB1-203ENST00000540627 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
KPNB1-203ENST00000540627 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
KPNB1-203ENST00000540627 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
KPNB1-203ENST00000540627 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
KPNB1-203ENST00000540627 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
KPNB1-203ENST00000540627 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
KPNB1-203ENST00000540627 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms