RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
CACFD1-206ENST00000540581 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
CACFD1-206ENST00000540581 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
CACFD1-206ENST00000540581 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
CACFD1-206ENST00000540581 MT1GP13640 62 aa5.26□□□□□ -1.57
CACFD1-206ENST00000540581 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
CACFD1-206ENST00000540581 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
CACFD1-206ENST00000540581 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
CACFD1-206ENST00000540581 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
CACFD1-206ENST00000540581 MT1MQ8N339 61 aa5.07□□□□□ -1.6
CACFD1-206ENST00000540581 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
CACFD1-206ENST00000540581 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
CACFD1-206ENST00000540581 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
CACFD1-206ENST00000540581 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
CACFD1-206ENST00000540581 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
CACFD1-206ENST00000540581 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
CACFD1-206ENST00000540581 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
CACFD1-206ENST00000540581 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CACFD1-206ENST00000540581 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
CACFD1-206ENST00000540581 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
CACFD1-206ENST00000540581 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
CACFD1-206ENST00000540581 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
CACFD1-206ENST00000540581 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
CACFD1-206ENST00000540581 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
CACFD1-206ENST00000540581 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
CACFD1-206ENST00000540581 SPRR2EP22531 72 aa4.51□□□□□ -1.69
CACFD1-206ENST00000540581 SPRR2BP35325 72 aa4.51□□□□□ -1.69
CACFD1-206ENST00000540581 SPRR2AP35326 72 aa4.51□□□□□ -1.69
CACFD1-206ENST00000540581 MT1AP04731 61 aa4.5□□□□□ -1.69
CACFD1-206ENST00000540581 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
CACFD1-206ENST00000540581 PRM1P04553 51 aa4.44□□□□□ -1.7
CACFD1-206ENST00000540581 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
CACFD1-206ENST00000540581 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
CACFD1-206ENST00000540581 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
CACFD1-206ENST00000540581 SPRR2DP22532 72 aa4.29□□□□□ -1.72
CACFD1-206ENST00000540581 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
CACFD1-206ENST00000540581 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
CACFD1-206ENST00000540581 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
CACFD1-206ENST00000540581 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
CACFD1-206ENST00000540581 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
CACFD1-206ENST00000540581 NEBP20929 6669 aa4.1□□□□□ -1.75
CACFD1-206ENST00000540581 MT3P25713 68 aa4.06□□□□□ -1.76
CACFD1-206ENST00000540581 LCE1EQ5T753 118 aa4□□□□□ -1.77
CACFD1-206ENST00000540581 MT4P47944 62 aa3.96□□□□□ -1.78
CACFD1-206ENST00000540581 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
CACFD1-206ENST00000540581 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
CACFD1-206ENST00000540581 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
CACFD1-206ENST00000540581 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CACFD1-206ENST00000540581 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
CACFD1-206ENST00000540581 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
CACFD1-206ENST00000540581 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
CACFD1-206ENST00000540581 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
CACFD1-206ENST00000540581 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
CACFD1-206ENST00000540581 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
CACFD1-206ENST00000540581 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
CACFD1-206ENST00000540581 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
CACFD1-206ENST00000540581 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
CACFD1-206ENST00000540581 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
CACFD1-206ENST00000540581 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
CACFD1-206ENST00000540581 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
CACFD1-206ENST00000540581 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
CACFD1-206ENST00000540581 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
CACFD1-206ENST00000540581 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.93
CACFD1-206ENST00000540581 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CACFD1-206ENST00000540581 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CACFD1-206ENST00000540581 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
CACFD1-206ENST00000540581 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
CACFD1-206ENST00000540581 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
CACFD1-206ENST00000540581 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
CACFD1-206ENST00000540581 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CACFD1-206ENST00000540581 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
CACFD1-206ENST00000540581 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
CACFD1-206ENST00000540581 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CACFD1-206ENST00000540581 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
CACFD1-206ENST00000540581 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
CACFD1-206ENST00000540581 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
CACFD1-206ENST00000540581 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 91.9 ms