RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 MUC2Q02817 5179 aa4.18□□□□□ -1.74
DNMT1-203ENST00000540357 SPRR2EP22531 72 aa4.14□□□□□ -1.75
DNMT1-203ENST00000540357 SPRR2BP35325 72 aa4.14□□□□□ -1.75
DNMT1-203ENST00000540357 SPRR2AP35326 72 aa4.14□□□□□ -1.75
DNMT1-203ENST00000540357 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
DNMT1-203ENST00000540357 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
DNMT1-203ENST00000540357 LCE2AQ5TA79 106 aaPredicted RBP4.09□□□□□ -1.75
DNMT1-203ENST00000540357 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
DNMT1-203ENST00000540357 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
DNMT1-203ENST00000540357 MT1MQ8N339 61 aa4.05□□□□□ -1.76
DNMT1-203ENST00000540357 SPRR2DP22532 72 aa4.03□□□□□ -1.76
DNMT1-203ENST00000540357 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
DNMT1-203ENST00000540357 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
DNMT1-203ENST00000540357 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
DNMT1-203ENST00000540357 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
DNMT1-203ENST00000540357 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
DNMT1-203ENST00000540357 PRM1P04553 51 aa3.86□□□□□ -1.79
DNMT1-203ENST00000540357 MT1AP04731 61 aa3.81□□□□□ -1.8
DNMT1-203ENST00000540357 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
DNMT1-203ENST00000540357 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
DNMT1-203ENST00000540357 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
DNMT1-203ENST00000540357 MT3P25713 68 aa3.67□□□□□ -1.82
DNMT1-203ENST00000540357 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
DNMT1-203ENST00000540357 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
DNMT1-203ENST00000540357 KMT2DO14686 5537 aa3.64□□□□□ -1.83
DNMT1-203ENST00000540357 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
DNMT1-203ENST00000540357 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
DNMT1-203ENST00000540357 USH2AO75445 5202 aa3.61□□□□□ -1.83
DNMT1-203ENST00000540357 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
DNMT1-203ENST00000540357 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
DNMT1-203ENST00000540357 MT4P47944 62 aa3.52□□□□□ -1.85
DNMT1-203ENST00000540357 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
DNMT1-203ENST00000540357 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
DNMT1-203ENST00000540357 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
DNMT1-203ENST00000540357 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
DNMT1-203ENST00000540357 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
DNMT1-203ENST00000540357 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
DNMT1-203ENST00000540357 NEBP20929 6669 aa3.26□□□□□ -1.89
DNMT1-203ENST00000540357 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
DNMT1-203ENST00000540357 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
DNMT1-203ENST00000540357 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
DNMT1-203ENST00000540357 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
DNMT1-203ENST00000540357 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
DNMT1-203ENST00000540357 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
DNMT1-203ENST00000540357 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
DNMT1-203ENST00000540357 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
DNMT1-203ENST00000540357 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
DNMT1-203ENST00000540357 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
DNMT1-203ENST00000540357 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
DNMT1-203ENST00000540357 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
DNMT1-203ENST00000540357 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
DNMT1-203ENST00000540357 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
DNMT1-203ENST00000540357 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
DNMT1-203ENST00000540357 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
DNMT1-203ENST00000540357 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.97
DNMT1-203ENST00000540357 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
DNMT1-203ENST00000540357 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
DNMT1-203ENST00000540357 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
DNMT1-203ENST00000540357 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
DNMT1-203ENST00000540357 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
DNMT1-203ENST00000540357 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
DNMT1-203ENST00000540357 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
DNMT1-203ENST00000540357 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
DNMT1-203ENST00000540357 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
DNMT1-203ENST00000540357 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
DNMT1-203ENST00000540357 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
DNMT1-203ENST00000540357 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
DNMT1-203ENST00000540357 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
DNMT1-203ENST00000540357 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
DNMT1-203ENST00000540357 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
DNMT1-203ENST00000540357 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
DNMT1-203ENST00000540357 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
DNMT1-203ENST00000540357 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
DNMT1-203ENST00000540357 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
DNMT1-203ENST00000540357 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
DNMT1-203ENST00000540357 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
DNMT1-203ENST00000540357 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms