RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
USP10-202ENST00000540269 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
USP10-202ENST00000540269 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
USP10-202ENST00000540269 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
USP10-202ENST00000540269 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
USP10-202ENST00000540269 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
USP10-202ENST00000540269 MT1MQ8N339 61 aa4.08□□□□□ -1.76
USP10-202ENST00000540269 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
USP10-202ENST00000540269 MT1GP13640 62 aa4.06□□□□□ -1.76
USP10-202ENST00000540269 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
USP10-202ENST00000540269 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
USP10-202ENST00000540269 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
USP10-202ENST00000540269 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
USP10-202ENST00000540269 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
USP10-202ENST00000540269 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
USP10-202ENST00000540269 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
USP10-202ENST00000540269 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
USP10-202ENST00000540269 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
USP10-202ENST00000540269 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
USP10-202ENST00000540269 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
USP10-202ENST00000540269 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
USP10-202ENST00000540269 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
USP10-202ENST00000540269 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
USP10-202ENST00000540269 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
USP10-202ENST00000540269 SPRR2EP22531 72 aa3.66□□□□□ -1.82
USP10-202ENST00000540269 SPRR2BP35325 72 aa3.66□□□□□ -1.82
USP10-202ENST00000540269 SPRR2AP35326 72 aa3.66□□□□□ -1.82
USP10-202ENST00000540269 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
USP10-202ENST00000540269 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
USP10-202ENST00000540269 MT1AP04731 61 aa3.62□□□□□ -1.83
USP10-202ENST00000540269 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
USP10-202ENST00000540269 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.84
USP10-202ENST00000540269 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
USP10-202ENST00000540269 SPRR2DP22532 72 aa3.5□□□□□ -1.85
USP10-202ENST00000540269 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
USP10-202ENST00000540269 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
USP10-202ENST00000540269 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
USP10-202ENST00000540269 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
USP10-202ENST00000540269 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
USP10-202ENST00000540269 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
USP10-202ENST00000540269 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
USP10-202ENST00000540269 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
USP10-202ENST00000540269 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
USP10-202ENST00000540269 NEBP20929 6669 aa3.3□□□□□ -1.88
USP10-202ENST00000540269 PRM1P04553 51 aa3.3□□□□□ -1.88
USP10-202ENST00000540269 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
USP10-202ENST00000540269 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
USP10-202ENST00000540269 MT3P25713 68 aa3.23□□□□□ -1.89
USP10-202ENST00000540269 MT4P47944 62 aa3.13□□□□□ -1.91
USP10-202ENST00000540269 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
USP10-202ENST00000540269 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
USP10-202ENST00000540269 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
USP10-202ENST00000540269 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
USP10-202ENST00000540269 LCE4AQ5TA78 99 aa3□□□□□ -1.93
USP10-202ENST00000540269 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
USP10-202ENST00000540269 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
USP10-202ENST00000540269 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
USP10-202ENST00000540269 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
USP10-202ENST00000540269 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
USP10-202ENST00000540269 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
USP10-202ENST00000540269 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
USP10-202ENST00000540269 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
USP10-202ENST00000540269 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
USP10-202ENST00000540269 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
USP10-202ENST00000540269 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
USP10-202ENST00000540269 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
USP10-202ENST00000540269 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
USP10-202ENST00000540269 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
USP10-202ENST00000540269 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
USP10-202ENST00000540269 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
USP10-202ENST00000540269 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
USP10-202ENST00000540269 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
USP10-202ENST00000540269 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
USP10-202ENST00000540269 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
USP10-202ENST00000540269 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
USP10-202ENST00000540269 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
USP10-202ENST00000540269 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
USP10-202ENST00000540269 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 113 ms