RNA–Protein interactions for RNA: ENST00000540249.5

PDHA1-212, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene PDHA1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-212ENST00000540249 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.68
PDHA1-212ENST00000540249 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
PDHA1-212ENST00000540249 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
PDHA1-212ENST00000540249 MT1EP04732 61 aa4.57□□□□□ -1.68
PDHA1-212ENST00000540249 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
PDHA1-212ENST00000540249 MT1GP13640 62 aa4.5□□□□□ -1.69
PDHA1-212ENST00000540249 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
PDHA1-212ENST00000540249 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
PDHA1-212ENST00000540249 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
PDHA1-212ENST00000540249 MT1MQ8N339 61 aa4.27□□□□□ -1.73
PDHA1-212ENST00000540249 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
PDHA1-212ENST00000540249 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
PDHA1-212ENST00000540249 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
PDHA1-212ENST00000540249 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
PDHA1-212ENST00000540249 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
PDHA1-212ENST00000540249 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
PDHA1-212ENST00000540249 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
PDHA1-212ENST00000540249 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
PDHA1-212ENST00000540249 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
PDHA1-212ENST00000540249 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
PDHA1-212ENST00000540249 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
PDHA1-212ENST00000540249 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
PDHA1-212ENST00000540249 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
PDHA1-212ENST00000540249 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
PDHA1-212ENST00000540249 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
PDHA1-212ENST00000540249 PRM1P04553 51 aa3.86□□□□□ -1.79
PDHA1-212ENST00000540249 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
PDHA1-212ENST00000540249 MT1AP04731 61 aa3.79□□□□□ -1.8
PDHA1-212ENST00000540249 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
PDHA1-212ENST00000540249 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
PDHA1-212ENST00000540249 SPRR2EP22531 72 aa3.71□□□□□ -1.81
PDHA1-212ENST00000540249 SPRR2BP35325 72 aa3.71□□□□□ -1.81
PDHA1-212ENST00000540249 SPRR2AP35326 72 aa3.71□□□□□ -1.81
PDHA1-212ENST00000540249 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.81
PDHA1-212ENST00000540249 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
PDHA1-212ENST00000540249 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
PDHA1-212ENST00000540249 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
PDHA1-212ENST00000540249 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
PDHA1-212ENST00000540249 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
PDHA1-212ENST00000540249 SPRR2DP22532 72 aa3.52□□□□□ -1.85
PDHA1-212ENST00000540249 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
PDHA1-212ENST00000540249 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
PDHA1-212ENST00000540249 MT3P25713 68 aa3.44□□□□□ -1.86
PDHA1-212ENST00000540249 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
PDHA1-212ENST00000540249 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
PDHA1-212ENST00000540249 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
PDHA1-212ENST00000540249 MT4P47944 62 aa3.27□□□□□ -1.89
PDHA1-212ENST00000540249 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
PDHA1-212ENST00000540249 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
PDHA1-212ENST00000540249 NEBP20929 6669 aa3.11□□□□□ -1.91
PDHA1-212ENST00000540249 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
PDHA1-212ENST00000540249 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
PDHA1-212ENST00000540249 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
PDHA1-212ENST00000540249 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
PDHA1-212ENST00000540249 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
PDHA1-212ENST00000540249 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
PDHA1-212ENST00000540249 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
PDHA1-212ENST00000540249 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
PDHA1-212ENST00000540249 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
PDHA1-212ENST00000540249 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
PDHA1-212ENST00000540249 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
PDHA1-212ENST00000540249 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
PDHA1-212ENST00000540249 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
PDHA1-212ENST00000540249 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
PDHA1-212ENST00000540249 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
PDHA1-212ENST00000540249 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
PDHA1-212ENST00000540249 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
PDHA1-212ENST00000540249 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
PDHA1-212ENST00000540249 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
PDHA1-212ENST00000540249 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
PDHA1-212ENST00000540249 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
PDHA1-212ENST00000540249 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
PDHA1-212ENST00000540249 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
PDHA1-212ENST00000540249 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
PDHA1-212ENST00000540249 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
PDHA1-212ENST00000540249 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
PDHA1-212ENST00000540249 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 73.5 ms