RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
SCNN1A-215ENST00000540037 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
SCNN1A-215ENST00000540037 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
SCNN1A-215ENST00000540037 MT1GP13640 62 aa4.53□□□□□ -1.68
SCNN1A-215ENST00000540037 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
SCNN1A-215ENST00000540037 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
SCNN1A-215ENST00000540037 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
SCNN1A-215ENST00000540037 KRTAP12-4P60329 112 aa4.4□□□□□ -1.7
SCNN1A-215ENST00000540037 MT1MQ8N339 61 aa4.37□□□□□ -1.71
SCNN1A-215ENST00000540037 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
SCNN1A-215ENST00000540037 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
SCNN1A-215ENST00000540037 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
SCNN1A-215ENST00000540037 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
SCNN1A-215ENST00000540037 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
SCNN1A-215ENST00000540037 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
SCNN1A-215ENST00000540037 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SCNN1A-215ENST00000540037 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
SCNN1A-215ENST00000540037 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
SCNN1A-215ENST00000540037 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
SCNN1A-215ENST00000540037 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
SCNN1A-215ENST00000540037 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
SCNN1A-215ENST00000540037 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
SCNN1A-215ENST00000540037 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
SCNN1A-215ENST00000540037 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.77
SCNN1A-215ENST00000540037 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
SCNN1A-215ENST00000540037 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
SCNN1A-215ENST00000540037 MT1AP04731 61 aa3.98□□□□□ -1.77
SCNN1A-215ENST00000540037 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
SCNN1A-215ENST00000540037 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
SCNN1A-215ENST00000540037 PRM1P04553 51 aa3.94□□□□□ -1.78
SCNN1A-215ENST00000540037 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
SCNN1A-215ENST00000540037 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
SCNN1A-215ENST00000540037 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
SCNN1A-215ENST00000540037 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
SCNN1A-215ENST00000540037 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
SCNN1A-215ENST00000540037 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
SCNN1A-215ENST00000540037 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
SCNN1A-215ENST00000540037 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
SCNN1A-215ENST00000540037 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
SCNN1A-215ENST00000540037 SPRR2EP22531 72 aa3.64□□□□□ -1.83
SCNN1A-215ENST00000540037 SPRR2BP35325 72 aa3.64□□□□□ -1.83
SCNN1A-215ENST00000540037 SPRR2AP35326 72 aa3.64□□□□□ -1.83
SCNN1A-215ENST00000540037 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
SCNN1A-215ENST00000540037 MT3P25713 68 aa3.48□□□□□ -1.85
SCNN1A-215ENST00000540037 SPRR2DP22532 72 aa3.45□□□□□ -1.86
SCNN1A-215ENST00000540037 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.86
SCNN1A-215ENST00000540037 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
SCNN1A-215ENST00000540037 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
SCNN1A-215ENST00000540037 MT4P47944 62 aa3.16□□□□□ -1.9
SCNN1A-215ENST00000540037 NEBP20929 6669 aa3.14□□□□□ -1.91
SCNN1A-215ENST00000540037 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
SCNN1A-215ENST00000540037 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
SCNN1A-215ENST00000540037 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
SCNN1A-215ENST00000540037 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
SCNN1A-215ENST00000540037 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
SCNN1A-215ENST00000540037 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
SCNN1A-215ENST00000540037 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
SCNN1A-215ENST00000540037 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
SCNN1A-215ENST00000540037 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
SCNN1A-215ENST00000540037 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
SCNN1A-215ENST00000540037 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
SCNN1A-215ENST00000540037 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
SCNN1A-215ENST00000540037 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
SCNN1A-215ENST00000540037 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SCNN1A-215ENST00000540037 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -2
SCNN1A-215ENST00000540037 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SCNN1A-215ENST00000540037 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
SCNN1A-215ENST00000540037 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
SCNN1A-215ENST00000540037 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
SCNN1A-215ENST00000540037 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
SCNN1A-215ENST00000540037 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SCNN1A-215ENST00000540037 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
SCNN1A-215ENST00000540037 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.05
SCNN1A-215ENST00000540037 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
SCNN1A-215ENST00000540037 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
SCNN1A-215ENST00000540037 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SCNN1A-215ENST00000540037 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 89.4 ms