RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 MT1EP04732 61 aa5.31□□□□□ -1.56
ATL3-203ENST00000538786 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
ATL3-203ENST00000538786 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
ATL3-203ENST00000538786 INE1O15225 51 aa5.26□□□□□ -1.57
ATL3-203ENST00000538786 MT1LQ93083 61 aa5.25□□□□□ -1.57
ATL3-203ENST00000538786 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
ATL3-203ENST00000538786 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
ATL3-203ENST00000538786 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
ATL3-203ENST00000538786 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
ATL3-203ENST00000538786 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
ATL3-203ENST00000538786 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
ATL3-203ENST00000538786 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
ATL3-203ENST00000538786 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
ATL3-203ENST00000538786 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
ATL3-203ENST00000538786 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
ATL3-203ENST00000538786 MT1GP13640 62 aa5.03□□□□□ -1.6
ATL3-203ENST00000538786 MT1MQ8N339 61 aa4.99□□□□□ -1.61
ATL3-203ENST00000538786 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
ATL3-203ENST00000538786 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
ATL3-203ENST00000538786 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
ATL3-203ENST00000538786 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
ATL3-203ENST00000538786 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
ATL3-203ENST00000538786 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
ATL3-203ENST00000538786 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
ATL3-203ENST00000538786 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
ATL3-203ENST00000538786 SPRR2EP22531 72 aa4.77□□□□□ -1.65
ATL3-203ENST00000538786 SPRR2BP35325 72 aa4.77□□□□□ -1.65
ATL3-203ENST00000538786 SPRR2AP35326 72 aa4.77□□□□□ -1.65
ATL3-203ENST00000538786 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
ATL3-203ENST00000538786 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
ATL3-203ENST00000538786 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
ATL3-203ENST00000538786 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
ATL3-203ENST00000538786 NEBP20929 6669 aa4.66□□□□□ -1.66
ATL3-203ENST00000538786 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
ATL3-203ENST00000538786 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
ATL3-203ENST00000538786 SPRR2DP22532 72 aa4.59□□□□□ -1.67
ATL3-203ENST00000538786 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
ATL3-203ENST00000538786 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
ATL3-203ENST00000538786 MT1AP04731 61 aa4.44□□□□□ -1.7
ATL3-203ENST00000538786 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
ATL3-203ENST00000538786 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
ATL3-203ENST00000538786 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
ATL3-203ENST00000538786 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
ATL3-203ENST00000538786 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
ATL3-203ENST00000538786 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
ATL3-203ENST00000538786 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
ATL3-203ENST00000538786 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
ATL3-203ENST00000538786 MT3P25713 68 aa4.02□□□□□ -1.77
ATL3-203ENST00000538786 MT4P47944 62 aa4□□□□□ -1.77
ATL3-203ENST00000538786 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
ATL3-203ENST00000538786 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
ATL3-203ENST00000538786 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
ATL3-203ENST00000538786 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
ATL3-203ENST00000538786 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
ATL3-203ENST00000538786 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
ATL3-203ENST00000538786 PRM1P04553 51 aa3.54□□□□□ -1.84
ATL3-203ENST00000538786 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
ATL3-203ENST00000538786 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
ATL3-203ENST00000538786 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
ATL3-203ENST00000538786 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.88
ATL3-203ENST00000538786 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
ATL3-203ENST00000538786 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
ATL3-203ENST00000538786 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
ATL3-203ENST00000538786 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
ATL3-203ENST00000538786 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
ATL3-203ENST00000538786 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
ATL3-203ENST00000538786 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
ATL3-203ENST00000538786 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
ATL3-203ENST00000538786 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
ATL3-203ENST00000538786 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
ATL3-203ENST00000538786 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
ATL3-203ENST00000538786 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
ATL3-203ENST00000538786 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
ATL3-203ENST00000538786 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
ATL3-203ENST00000538786 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
ATL3-203ENST00000538786 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
ATL3-203ENST00000538786 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 85.1 ms